Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq7 120 5e-25 seq1 113 7e-23 seq11 93.3 7e-17 seq113 91.5 2e-16 seq8 82.4 1e-13 >seq7 Length=15066089 Score = 120 bits (132), Expect = 5e-25 Identities = 99/120 (83%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| || | | || ||| ||||||||||||||||||||||| |||||||| Sbjct 8671220 CTAGTTAGCACGTCACAATTTCATTCATTATCGGAATTAACCAGACAAATTGCTCCACCA 8671279 Query 202 ACTAAGAACGGCCATGCA---CCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| || ||||||| |||||| |||||||||||||||| |||| Sbjct 8671280 ACTAAGAACGGCCATTCAGGGGAGCCACCCACAGAATCGAGAAAGAGCTATCAATTTGTC 8671339 >seq1 Length=23840500 Score = 113 bits (124), Expect = 7e-23 Identities = 86/102 (84%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| || |||||||||||||| |||||||||||||||||| |||| | Sbjct 20805428 CTAGTTAGCATGTCGTAGTCTCGTTCGTTATGGGAATTAACCAGACAAATTTCTCCTCAC 20805487 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 |||||||||||||||||||| || |||| |||||| |||||| Sbjct 20805488 ACTAAGAACGGCCATGCACCGCCTCCCACAGAATCGAGAAAG 20805529 >seq11 Length=11183424 Score = 93.3 bits (102), Expect = 7e-17 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 ||||||||||||||||| |||||||||||||||||| || ||| ||||| ||||||||| Sbjct 6110018 CTCCACCAACTAAGAACAGCCATGCACCACCACCCACAGGATCCAGAAATAGCTATCAAG 6109959 Query 254 CTGTCC 259 |||||| Sbjct 6109958 CTGTCC 6109953 >seq113 Length=1962407 Score = 91.5 bits (100), Expect = 2e-16 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 147 TAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAA 206 ||||| || | ||||| | ||||||| ||||||||| ||||||| | |||||| ||| Sbjct 1694842 TAGCATGTCAGAGTCTCCTCCGTTATCAAAATTAACCAAACAAATCGCACCACCAGTTAA 1694901 Query 207 GAACGGCCATGCACCACCACCCA 229 ||||||||||||||||||||||| Sbjct 1694902 GAACGGCCATGCACCACCACCCA 1694924 >seq8 Length=13932129 Score = 82.4 bits (90), Expect = 1e-13 Identities = 91/119 (76%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | | |||| ||| | | | |||||||||||||| ||||||||| || Sbjct 10015733 CTAGTTAGCATGCTGAAGTCTTGTTTGGTGTTGGAATTAACCAGAC-TATCACTCCATCA 10015791 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCT 260 | |||| |||||||||| |||||||| | ||| | ||||| | ||| || ||||| Sbjct 10015792 TCCAAGAGCGGCCATGCAAAACCACCCAGATAATTGATAAAGA-CAATCTTTCAGTCCT 10015849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796729764819