Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq62 237 3e-60 seq10 228 1e-57 seq15 187 4e-45 seq4 156 7e-36 seq14 127 3e-27 seq77 109 9e-22 seq2 109 9e-22 seq43 100 5e-19 seq8 100 5e-19 seq11 96.9 6e-18 seq12 87.8 3e-15 seq55 84.2 4e-14 seq81 82.4 1e-13 seq228 80.6 5e-13 seq57 75.2 2e-11 seq29 75.2 2e-11 >seq62 Length=3879310 Score = 237 bits (262), Expect = 3e-60 Identities = 212/265 (80%), Gaps = 13/265 (5%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||| ||||||||| | | |||||||||||||||||| || || Sbjct 3139577 TCATCAGTAGGGTAAAATGAACCTGTCTAA---CAGTCTAAACCCAGCTCACGCTCTTTA 3139633 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||| |||| |||||||||||| |||||||| Sbjct 3139634 TTAGTGGGTGAACAATCCAGTGCTTGGTGAATTCTGCTTCACAATGATAGG--------- 3139684 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||| |||||||||||||| ||| |||||||||| |||||| |||||||||||||||||| Sbjct 3139685 CATCAAAGGATCAAAAAGCGACGCCGCTATGAACCCTTGGCCGCCACAAGCCAGTTATCC 3139744 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 | ||||||||||||||| ||||| ||| | ||| | | | | ||||||| | ||| Sbjct 3139745 CCGTGGTAACTTTTCTGAAACCTCCAGCTTAAAACCCCCAAAGTCAAAAGGATTGTGAGG 3139804 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 || |||||||| || ||||||||| Sbjct 3139805 CCCCACTTTCA-CGTCTGTATTCAC 3139828 >seq10 Length=12214001 Score = 228 bits (252), Expect = 1e-57 Identities = 176/214 (82%), Gaps = 20/214 (9%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| Sbjct 8051782 TCATCAGTAGGGTAAAACTAACCCGTCTCACAACGGTCTAAACCCAGCTCACGTTCCCTA 8051841 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||||||||||||||| ||| |||||||||||| Sbjct 8051842 TTAGTGGGTGAACAATCCAACGCT--------------------TGACAGGAAGAGCCGA 8051881 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||||||||||||||| || ||||||||| ||||| |||||||||||||||||| Sbjct 8051882 CATGGAAGGATCAAAAAGCAATGTTGCTATGAACTTTTGGCCGCCACAAGCCAGTTATCC 8051941 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 |||||| ||||||| |||||| ||| | ||| Sbjct 8051942 CTGTGGCAACTTTTTAAACACCTCCAGCTTAAAA 8051975 >seq15 Length=10076045 Score = 187 bits (206), Expect = 4e-45 Identities = 124/138 (90%), Gaps = 5/138 (4%) Strand=Plus/Plus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 ||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 1540027 TAGGGAAAAACTAACCTGTCTCACGACGGTCTAAAC-----TCACGTTCCCTATTAGTGG 1540081 Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 |||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 1540082 GTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAA 1540141 Query 158 GGATCAAAAAGCAACGTC 175 |||||||||||| ||||| Sbjct 1540142 GGATCAAAAAGCGACGTC 1540159 >seq4 Length=16571924 Score = 156 bits (172), Expect = 7e-36 Identities = 173/232 (75%), Gaps = 23/232 (10%) Strand=Plus/Minus Query 41 GGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100 |||||||||||||||| ||||||| ||| ||||||||| | ||||| |||||||||| Sbjct 913402 GGTAAAACTAACCTGTGTCATGAC----TAATCCCAGCTCATGCTCCCTGTTAGTGGGTG 913347 Query 101 AACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGA 160 | | |||||||||||| |||| | |||||||||||| ||||| Sbjct 913346 -----------GGT----GAATTCTGCTTCACAATGACGGAAAGAGCCGACATTGAAGGG 913302 Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220 ||||||||| || | | |||||||| | ||||||||| ||||||||||||||||| Sbjct 913301 TCAAAAAGCGAC----CAAAGAACGCTTTCCCGCCACAAGCTTGTTATCCCTGTGGTAAC 913246 Query 221 TTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||| |||||| || | ||| | || | | |||||||| |||||| Sbjct 913245 TTTTCTGACACCTCCTGCTTAAAACCGCAAGAGTCAGAAGGATCGTTAGGCC 913194 >seq14 Length=10418222 Score = 127 bits (140), Expect = 3e-27 Identities = 87/99 (88%), Gaps = 7/99 (7%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 |||||| |||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 4455865 CATCAGCAGGGTAAAACTAACCTGTCTCA-------CTAAACCCAGCTCATGTTCCCTAT 4455813 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 |||||||||||||||||||||||| |||||||||||| Sbjct 4455812 TAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTC 4455774 >seq77 Length=3037991 Score = 109 bits (120), Expect = 9e-22 Identities = 94/116 (81%), Gaps = 4/116 (3%) Strand=Plus/Minus Query 65 GGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTC 124 ||||||| || ||||||||||||||||| || ||||||||||| ||| |||||| Sbjct 2361096 GGTCTAATCCAAGCTCACGTTCCCTATTGGTAGGTGAACAATCA----CTTGGTGAATTC 2361041 Query 125 TGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||| || |||||||||||||| ||||| |||||||||||| || |||||||| Sbjct 2361040 TGCGTCACAATGATAGGAAGAGCTTACATCAAAGGATCAAAAAACAGTGTCGCTAT 2360985 >seq2 Length=19631327 Score = 109 bits (120), Expect = 9e-22 Identities = 104/136 (76%), Gaps = 14/136 (10%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||| || |||||||||| | ||||||||| || |||||||||||||||||||||||||| Sbjct 13364830 TCACCAACAGGGTAAAACCAGCCTGTCTCACGATGGTCTAAACCCAGCTCACGTTCCCTA 13364771 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | | ||||||||||| ||| | |||| ||||||| ||||||||| Sbjct 13364770 TCACTGGGTGAACAACCCAGC--------------ACTTCACAATGATAGTAAGAGCCGA 13364725 Query 151 CATCGAAGGATCAAAA 166 || | ||||||||||| Sbjct 13364724 CACCAAAGGATCAAAA 13364709 >seq43 Length=4607815 Score = 100 bits (110), Expect = 5e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 || |||| |||||||||| |||||||| || ||| |||| | |||||||||||| || Sbjct 2312221 TCGTCAGCAGGGTAAAACAAACCTGTCCCACGACAGTCTGATCCCAGCTCACGTACCTCC 2312162 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTC 130 ||| | |||||||||||||||||| |||||||||||| Sbjct 2312161 TTATTAAGTGAACAATCCAACGCTTGATGAATTCTGCTTC 2312122 >seq8 Length=13932129 Score = 100 bits (110), Expect = 5e-19 Identities = 147/211 (70%), Gaps = 23/211 (11%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| ||||||||| |||| |||||| |||||||||| |||||| ||| || Sbjct 6066785 TCATCAGGCGGGTAAAACGAACCCGTCTCA----GGTCTAAACCTGGCTCACTTTCTCTG 6066730 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||| || || |||||| ||| | || | ||||||||||| | |||| | Sbjct 6066729 TTATTGAGTAAACAATGCAAAGTTTGGCAAATTCTGCTTC------------ACAGCCAA 6066682 Query 151 CATCGAAGGATCAAAAAGCAAC-------GTCGCTATGAACGCTTGGCTGCCACAAGCCA 203 | |||||| ||| ||| |||| || ||||||| ||||| | ||||| | || Sbjct 6066681 AACCGAAGGCTCAGAAATCAACCCACTGAGTTGCTATGAGCGCTTAGACACCACAGGTCA 6066622 Query 204 GTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||| | | |||| | ||| |||| || ||| Sbjct 6066621 GTTACCTCGGTGGGATCTTGTCTGACAGCTC 6066591 >seq11 Length=11183424 Score = 96.9 bits (106), Expect = 6e-18 Identities = 58/61 (95%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 55 GTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCT 114 |||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2425801 GTCTCACGATGGTCTAAACCCAGCTCACGTTTCCTATTAGTGGGTGAACAATCCAACGCT 2425860 Query 115 T 115 | Sbjct 2425861 T 2425861 >seq12 Length=11141601 Score = 87.8 bits (96), Expect = 3e-15 Identities = 88/116 (76%), Gaps = 9/116 (8%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||| |||| | |||||||||| | |||| |||| | ||||| ||| Sbjct 1894228 GAATTCTACTTCAGCGTGATAGGAAGCACTGACACTCAAGGTTAAAAAAAAAAC------ 1894175 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 || |||||||||||| |||||||||||||||||||||| ||||||| || ||| Sbjct 1894174 ---AATGCTTGGCTGCCAGAAGCCAGTTATCCCTGTGGTAAGTTTTCTGACATCTC 1894122 >seq55 Length=4282056 Score = 84.2 bits (92), Expect = 4e-14 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 171 ACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCA 230 ||||| |||||||| ||||||||||||| |||||||||| |||||||||| |||||| | Sbjct 3227746 ACGTCACTATGAACTCTTGGCTGCCACAGGCCAGTTATCACTGTGGTAACATTTCTGACG 3227805 Query 231 CCTC 234 |||| Sbjct 3227806 CCTC 3227809 >seq81 Length=2813517 Score = 82.4 bits (90), Expect = 1e-13 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 |||||||||||||||||||||| |||| ||| ||| ||||||||||| | |||| ||| Sbjct 2300052 AGGGTAAAACTAACCTGTCTCACAACGGATTAA-CCCTGCTCACGTTCCTTGTTAGAGGG 2300110 Query 99 TGAACAATCCAA 110 | |||||||||| Sbjct 2300111 TTAACAATCCAA 2300122 >seq228 Length=608455 Score = 80.6 bits (88), Expect = 5e-13 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||| ||||||||||||||| ||||| ||||| ||||||||| |||| ||||||| Sbjct 132519 TCATCAGTGGGGTAAAACTAACCTTTCTCACAACGGTTTAAACCCAGGTCACATTCCCTA 132460 Query 91 TT 92 || Sbjct 132459 TT 132458 >seq57 Length=4092092 Score = 75.2 bits (82), Expect = 2e-11 Identities = 63/77 (82%), Gaps = 4/77 (5%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAG----CTCACGTTCCCTATTAG 94 || |||||||||| | |||||||| |||||||||||| ||||| |||||| |||| Sbjct 2461714 AGAGTAAAACTAATGGGCCTCATGACAGTCTAAACCCAGGTCACTCACATTCCCTTTTAG 2461773 Query 95 TGGGTGAACAATCCAAC 111 |||||||||||| ||| Sbjct 2461774 CGGGTGAACAATCTAAC 2461790 >seq29 Length=6224470 Score = 75.2 bits (82), Expect = 2e-11 Identities = 71/88 (81%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| ||||| |||||| | || | ||||||| |||||||||||||||| ||| Sbjct 4064963 TACTGAGCAGAATTCCCATTGCAACAACAGATCATCAGCAGGGTAAAACTAACCTCTCTT 4065022 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCC 87 ||| | |||||| ||||||||| |||| Sbjct 4065023 ATGGAGTTCTAAATCCAGCTCAC-TTCC 4065049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854322258144