Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq87 82.4 9e-14 seq64 75.2 1e-11 >seq87 Length=2722511 Score = 82.4 bits (90), Expect = 9e-14 Identities = 81/101 (80%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 1140373 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 1140431 Query 70 --TAAGCCTGCTTTGAACACTCTAATTTTCT-CAAGGTAAA 107 | |||||||||||||||||||||||| | ||| ||||| Sbjct 1140432 ACTGGGCCTGCTTTGAACACTCTAATTTTTTCCAAAGTAAA 1140472 >seq64 Length=3855204 Score = 75.2 bits (82), Expect = 1e-11 Identities = 70/87 (80%), Gaps = 3/87 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 3440318 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 3440260 Query 70 T--AAGCCTGCTTTGAACACTCTAATT 94 | |||||||||||||||||||||| Sbjct 3440259 ACCAGGCCTGCTTTGAACACTCTAATT 3440233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595147535166