Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-17 seq87 91.5 2e-16 seq64 82.4 8e-14 >seq4 Length=16571924 Score = 93.3 bits (102), Expect = 4e-17 Identities = 129/178 (72%), Gaps = 6/178 (3%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| ||||||||||||| |||| |||||| | | | Sbjct 8230944 TTTACTTTGAAAAAATTAGAGTTTTCAAAGCAGGCCCTGTTGCCTGAATACCGCAACTAG 8230885 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTT---TCTAGGACCGCCCGTAAT 127 ||||||| |||| | || | |||||||||||||| |||| ||| || | | | Sbjct 8230884 GAATAATGGAATGGTAC-TCCGGTTCTATTTTGTGGGTTTTCTCTCTGAACTGGGGCTGT 8230826 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 ||| || | ||| |||||| | ||||||| | | |||||||||||||||| Sbjct 8230825 GATTAAGAGGGACGCCCGGGGGCATTAGTATTCTGCCGCTAGAGGTGAAATTCTTGGA 8230768 >seq87 Length=2722511 Score = 91.5 bits (100), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 13 TTTACTTTG-AAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCAT 69 ||||||||| |||||||||||| |||||||||||||| | || |||||| | | Sbjct 1140472 TTTACTTTGGAAAAAATTAGAGTGTTCAAAGCAGGCCCAGTCGCCTGAATACCGCAGCTA 1140413 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 |||||||| ||||||||| | |||||||||||||| ||||| Sbjct 1140412 GGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTT 1140373 >seq64 Length=3855204 Score = 82.4 bits (90), Expect = 8e-14 Identities = 119/165 (72%), Gaps = 6/165 (4%) Strand=Plus/Plus Query 26 AATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACCATGGAATAATAGAATA 83 |||||||| ||||||||||||||| | || |||||| | | |||||||| ||||| Sbjct 3440233 AATTAGAGTGTTCAAAGCAGGCCTGGTCGCCTGAATACCGCAGCTAGGAATAATGGAATA 3440292 Query 84 GGACGTGCGGTTCTATTTTGTAGGTT---TCTAGGACCGCCCGTAATGATAAATACGGAT 140 |||| | |||||||||||||| |||| ||| || | | ||||| || | |||| Sbjct 3440293 GGAC-TCCGGTTCTATTTTGTGGGTTTTCTCTCTGAACTTGGGCCATGATTAAGAGGGAT 3440351 Query 141 AGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | | |||| | ||||| | | |||||||||||||||| Sbjct 3440352 GGCCAGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 3440396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511954868960