Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq8 329 1e-87 seq266 251 2e-64 seq205 233 6e-59 seq151 165 3e-38 seq3 158 4e-36 seq66 147 7e-33 seq29 107 6e-21 seq38 102 3e-19 seq211 96.9 1e-17 seq12 95.1 4e-17 >seq8 Length=13932129 Score = 329 bits (364), Expect = 1e-87 Identities = 250/295 (85%), Gaps = 5/295 (2%) Strand=Plus/Minus Query 239 CCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACA 298 |||||||||||||||||||||| ||| ||||||| | | |||||| |||| | ||||| Sbjct 7094119 CCCACTTATTCTACACCTCTCATGTCTTTTCACAGTGCCAAACTAGAATCAAACCCAACA 7094060 Query 299 GGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAT 358 ||||||||||||||| ||||||| || || ||||||||||||||||||||||| | ||| Sbjct 7094059 GGGTCTTCTTTCCCCACTGATTCTGCAAAACCCGTTCCCTTGGCTGTGGTTTCTCAAGAC 7094000 Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 || || ||||||||||||||||||| || ||||||||||| |||||||| | |||||| Sbjct 7093999 AGCAGCTAGGGACAGTGGGAATCTCATTCCTCCATTCATGCATGTCACTAAGTTGATGAC 7093940 Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 || |||||||||||||||| |||||| |||||||||| || ||||| || |||| Sbjct 7093939 TAGACATTTGGCTACCTTAACAGAGTCGTAGTTACTCCTGCTGTTTATCCAAGCTT---- 7093884 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||| || ||||||| |||||||||||||||||||||| |||||| Sbjct 7093883 -CATTTCTTCACTTCGATATTCAGAACACTGGGCAGAAATCACATTGCATCAACA 7093830 >seq266 Length=407943 Score = 251 bits (278), Expect = 2e-64 Identities = 147/152 (97%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 287 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTG 346 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 76355 TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTG 76296 Query 347 GTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCAC 406 |||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||| Sbjct 76295 GTTTCGCTAGATAGCAGCTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCAC 76236 Query 407 TAATTAGATGACGAGGCATTTGGCTACCTTAA 438 |||||||||||||||||||||||||||||||| Sbjct 76235 TAATTAGATGACGAGGCATTTGGCTACCTTAA 76204 >seq205 Length=762381 Score = 233 bits (258), Expect = 6e-59 Identities = 137/142 (96%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 100955 CAGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 101014 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 101015 ATAGCAGCTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 101074 Query 417 ACGAGGCATTTGGCTACCTTAA 438 |||||||||||||||||||||| Sbjct 101075 ACGAGGCATTTGGCTACCTTAA 101096 >seq151 Length=1413105 Score = 165 bits (182), Expect = 3e-38 Identities = 97/101 (96%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1370856 CCTTAAAAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTT 1370797 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||| ||||||||| Sbjct 1370796 TGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1370756 >seq3 Length=19510765 Score = 158 bits (174), Expect = 4e-36 Identities = 119/140 (85%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 396 ATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC 455 |||| | |||||| ||||||||| | |||||||||||||| |||||| |||||||||||| Sbjct 6578764 ATGCACTTCACTAGTTAGATGACAAAGCATTTGGCTACCTGAAGAGAATCATAGTTACTC 6578823 Query 456 CCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGA 515 |||| |||||||| |||| ||||||||||||||||||| ||||||||||| |||| Sbjct 6578824 TCGCCATTTACCCGTGCTTCATTGAATTTCTTCACTTTGA----CAGAGCACTGGTCAGA 6578879 Query 516 AATCACATTGCGTCAACATC 535 | ||||| || | ||||||| Sbjct 6578880 ATTCACACTGTGCCAACATC 6578899 >seq66 Length=3766345 Score = 147 bits (162), Expect = 7e-33 Identities = 86/88 (98%), Gaps = 1/88 (1%) Strand=Plus/Minus Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 437 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 390479 AATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTA 390420 Query 438 AGAGAGTCATAGTTACTCCCGCC-GTTT 464 ||||||||||||||||||||||| |||| Sbjct 390419 AGAGAGTCATAGTTACTCCCGCCAGTTT 390392 >seq29 Length=6224470 Score = 107 bits (118), Expect = 6e-21 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || |||||||||||||| ||||||| || ||||||| || ||| | |||||||||| Sbjct 3753725 CTCCCTTAAGAGAGTCACGATTACTCCTGCAGTTTACCTGCACTTTCTGAAATTTCTTCA 3753666 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||| |||||||||| ||||||||||||||| ||| | |||||| Sbjct 3753665 CTTCGACATTCAGACCACTGGGCAGAAATCTCATCACCTCAACA 3753622 >seq38 Length=4945250 Score = 102 bits (112), Expect = 3e-19 Identities = 88/108 (81%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| ||||| | ||||||| |||| |||| | ||||||||||||||||||| Sbjct 1613073 CTTCTGCTCCACAGGTGGTTTCTGTCCTCCCTGAGCTCACCTTAGGACACCTGCGTTACA 1613132 Query 67 GTTT-AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||||||| | ||||||| |||| ||||||||| || |||| Sbjct 1613133 GTTTGGACAGATGTACTGCCCCAGTCAAAGCCCCCACCTGCCACTGTC 1613180 >seq211 Length=703540 Score = 96.9 bits (106), Expect = 1e-17 Identities = 78/99 (79%), Gaps = 18/99 (18%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 ||||||||||||||||||||||||||||| ||| || ||||| Sbjct 147710 TTAAGAGAGTCATAGTTACTCCCGCCGTTGACCTGC------------------ACTTTA 147751 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| Sbjct 147752 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 147790 >seq12 Length=11141601 Score = 95.1 bits (104), Expect = 4e-17 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 455 CCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 ||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 848421 CCCACCGTTTACCTGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTAGGCAG 848480 Query 515 AAATCACATTGC 526 || ||||||| Sbjct 848481 TCATAACATTGC 848492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635051213152