Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neolamprologus_20brichardi_20[refseq_20GCF_5F000239395.1_202011-12- 22] 9,099 sequences; 847,910,432 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq66 302 1e-79 seq162 170 6e-40 seq40 161 3e-37 seq19 154 4e-35 seq61 123 8e-26 seq3 100 9e-19 seq26 95.1 4e-17 seq176 91.5 4e-16 seq14 77.0 1e-11 >seq66 Length=3766345 Score = 302 bits (334), Expect = 1e-79 Identities = 240/284 (85%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 406696 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 406755 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 406756 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 406815 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 406816 TTCTCAGGCTCCCTCTCCGGAATCGAACCCGGATTCCCCGTTACCCGTGGTCACCATGGT 406875 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 406876 AGGCACATAAAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 406935 Query 240 TC--AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA 279 | | ||||| ||||| | | | ||||| || ||||||| Sbjct 406936 ACGGAGGGCCA-GCGATCGGCTCGAGGTTATCTAGAGTCACCAA 406978 >seq162 Length=1293152 Score = 170 bits (188), Expect = 6e-40 Identities = 180/232 (78%), Gaps = 5/232 (2%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||| |||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 580863 CTCATTCACATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTCC 580804 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | | ||||||| || | ||||| |||| |||||||||||||||||||||||| ||||| Sbjct 580803 CTGAGTCGGGAGGGGATCATTTGTGCGCGTGCTGCCTTCCTTGGATGTGGTAGTCGTTTG 580744 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTG-ATACCATGGTAG 181 ||||| | ||||||||||||||||||| ||||| | ||||| || | | ||||| || Sbjct 580743 TCAGGTT--CTCTCCGGAATCGAACCCTGATTCCTCATTACCTGTGGTCAAACATGGCAG 580686 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC 233 || | | |||||||||||| ||| ||| || |||| | | ||||| Sbjct 580685 GCAGAAAAAGTGCCATCGAAAGTTAATATGGC-GAGCATTGATTCAGCCATC 580635 >seq40 Length=4773581 Score = 161 bits (178), Expect = 3e-37 Identities = 238/334 (71%), Gaps = 30/334 (9%) Strand=Plus/Minus Query 172 ACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 |||||||||||| || ||||||| |||||||||||||| || |||||||||| || Sbjct 2757684 ACCATGGTAGGCACATAAAATACCATCAAAAGTTGATAGGGCCGACATTTGAATGAGGCA 2757625 Query 232 TCGCCGGCTCA-AGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAA---GGAGCC 285 || ||| | || ||| | | ||| | | | ||||| || ||||||| || ||| Sbjct 2757624 TCACCGCCACAGAGGGCCAGTGATCAGCTCGAGGTTATCTAGAGTCACCAACGCGGCGCC 2757565 Query 286 CCGAAGGG---------CGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGG 336 || |||| | ||||||| ||| |||| | ||| | | || | Sbjct 2757564 CCTGAGGGTACACCCCACAAGGGTTTTTGGTCTGATAAGTGCACGCATACCCAG------ 2757511 Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATC 395 || || |||||||||||||||| |||| |||||||| ||||| | | | ||| Sbjct 2757510 ------AGGAT-TATTAGCTCTAGAATTGCCACAGTTATCCAAGTAGTGGATGAGCGATC 2757458 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 | | ||| ||||||||||||||||||||||||||||||||||| | | | | ||| Sbjct 2757457 ATAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGCACCGGCCACATGTAC 2757398 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||| ||||| |||| |||||||||||||||| Sbjct 2757397 TTAGACCTGCAT-GCTTTATCTTTGAGACAAGCA 2757365 >seq19 Length=7756450 Score = 154 bits (170), Expect = 4e-35 Identities = 144/183 (79%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 45 TTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 ||| || ||||||||| || | ||| ||| ||| |||||| || ||| ||||||| | Sbjct 1209524 TTTTTTATCACTACCTTCCTGAGTCAGGAGTGGAAAATTTGTGCACCTACTGCCTTAGCT 1209465 Query 105 GGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 || |||||||| ||||||||| |||| ||||| |||||||||||| |||||| ||| | Sbjct 1209464 GGCTGTGGTAGTGGTTTCTCAGACTCCTTCTCCAGAATCGAACCCTGATTCCCTCTTAGC 1209405 Query 165 CGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAA 224 ||| | ||||| |||||| || ||||| ||||| |||||||||||| ||||||| Sbjct 1209404 CGTGGTCACCATAGTAGGCATATAAAGTACCACTGAAAGCTGATAGGGCAGACATTTGAA 1209345 Query 225 TGA 227 ||| Sbjct 1209344 TGA 1209342 >seq61 Length=3938033 Score = 123 bits (136), Expect = 8e-26 Identities = 85/95 (89%), Gaps = 1/95 (1%) Strand=Plus/Minus Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 ||||||||||||||||||||||||| |||||| | || | ||||||||| ||||||| Sbjct 705378 TGATTTAATGAGCCATTCGCAGTTTTACTGTACCGGCCGCGTGTACTTAGACCTGCATGG 705319 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| |||||||||| Sbjct 705318 CTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 705285 >seq3 Length=19510765 Score = 100 bits (110), Expect = 9e-19 Identities = 122/162 (75%), Gaps = 12/162 (7%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-ATCAAATAAA 402 |||||| |||||| |||||| |||||||| || | | | | |||||| || Sbjct 8849007 GCATGT--TAGCTCCAGAATT------GTTATCCAAATAACCAAGGAGTGATCAAAGGAA 8849058 Query 403 CGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACA 462 | ||||||||||||||||||||||| ||| ||||||| |||| | |||||| || Sbjct 8849059 CCATAACTGATTTAATGAGCCATTCACAGCTTCACTGAGGCAGTTGCATGTACTTACACC 8849118 Query 463 TGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| |||||| ||||| || ||||| ||||||||||| Sbjct 8849119 AGCATGGATTAATC--TGAGATAAACATAT-ACTACTGGCAG 8849157 Score = 96.9 bits (106), Expect = 1e-17 Identities = 132/179 (74%), Gaps = 9/179 (5%) Strand=Plus/Plus Query 7 ATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65 |||| ||||||| | || ||| || ||||| ||||||||| | |||| |||||| Sbjct 8848730 ATTCTAATTACAGGGCCTTGAAAAAGTCCTGTGTCAGTATTTTTCTCCACTGT-TCCCCG 8848788 Query 66 TG-TCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTC 124 | || ||| |||| | | | | |||||||| |||||||||||||| | |||||| Sbjct 8848789 AGGTCAGGAGTGGGCAG---GAGTG---GCTGCCTTTCTTGGATGTGGTAGGCATTTCTC 8848842 Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183 ||||||| ||||| |||| ||||||||| || ||||||| ||||||||| || Sbjct 8848843 AGGCTCCTTCTCCAGAATTGAACCCTAAATCTGTGTTACCCACAATCACCATGGTACGC 8848901 >seq26 Length=6558494 Score = 95.1 bits (104), Expect = 4e-17 Identities = 157/223 (70%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAA-GAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||| |||| | ||| ||| ||| | |||| ||||| | ||| || Sbjct 493332 GTACTCATTCCAGCTACAGGTCCCCAAACGAGTTCGGTATTGTTATTTTTCATCA-TAAG 493274 Query 60 TCCCCGTGTCGG-GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCG 118 ||| | | | |||||||||||||| | | |||||| ||||||||||| | ||||| | Sbjct 493273 TCCTCTGAACTGAGATTGGGTAATTTGTGTGACTGCTGGCTTCCTTGGATATAGTAGCTG 493214 Query 119 TTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 | || ||| | ||||| | | || || || ||||| ||||| | | | || |||| Sbjct 493213 TGTCCAAGGGTTCCTCTACAGGATTAAATCCGGATTCCTTGTTACTCATGGCCACAATGG 493154 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT 221 | || || ||||||| | || |||| ||||||| |||| Sbjct 493153 CACGCACATAAAGTACCATCAAGAGATGATTGGGCAGACATTT 493111 >seq176 Length=1064379 Score = 91.5 bits (100), Expect = 4e-16 Identities = 71/85 (84%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 71 GGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTC 130 ||| |||||||||||| ||||||||| ||| |||||||||||||| ||||| |||||| Sbjct 454643 GGAGTGGGTAATTTGCATGCCTGCTGCTTTCTTTGGATGTGGTAGCACTTTCTTAGGCTC 454584 Query 131 CCTCTCCGGAATCGAACCCTAATTC 155 || ||| | |||| | |||| |||| Sbjct 454583 CCGCTCTGCAATCAAGCCCTGATTC 454559 >seq14 Length=10418222 Score = 77.0 bits (84), Expect = 1e-11 Identities = 88/117 (75%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||| ||||||| ||| | || |||||||| | |||| ||||| ||||||| | Sbjct 878483 TACTAATTCCAACTACTGGGCCTCAAAAGAGTCATGTACTGTTATTTTCCATCACTACTT 878542 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCC 117 | || |||| |||||||||||| ||||||||| ||||||||| |||||||| Sbjct 878543 CTTTAAGTTGGGAATGGGTAATTTGCTTCCCTGCTGCCATCCTTGGATATGGTAGCC 878599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510262568704