Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2 181 2e-43 seq10 163 4e-38 seq1 149 9e-34 seq7 96.9 5e-18 seq5 93.3 6e-17 >seq2 Length=88342039 Score = 181 bits (200), Expect = 2e-43 Identities = 186/235 (79%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 76936381 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 76936438 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || ||||||||| | ||||| ||||||| |||| | || Sbjct 76936439 CTCGTTGATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 76936498 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 76936499 ACCCACGCCTCTCGGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 76936557 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 76936558 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 76936611 Score = 82.4 bits (90), Expect = 1e-13 Identities = 111/151 (74%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 59 TCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA- 117 |||||||||| | || ||||||||| | ||||| ||||||| |||| | Sbjct 76935149 TCCTCGTTGATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGG 76935208 Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGT 176 |||||| |||| ||||| || | | | || || ||| | || ||||||| | |||||| Sbjct 76935209 TTACCCACACCTCTCGGCGAACGGTAGACACACGCTGA-TCCACTCAGTGTGGTGCGCGT 76935267 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGAC 207 || |||| | |||| |||||||||||||||| Sbjct 76935268 GCTGCCCCGGACATGTAAGGGCATCACAGAC 76935298 >seq10 Length=57197669 Score = 163 bits (180), Expect = 4e-38 Identities = 182/235 (77%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||| ||| ||||| |||| ||||| || ||| | Sbjct 56824980 GTACAAAGGGCAGGGACTTAATCAACGCGAACTT-ATGACCCGCGATTACTGGGCATT-C 56825037 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || || |||||| | ||||| ||||||| |||| | || Sbjct 56825038 CTCGTTGATGGGAAATAACTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 56825097 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 56825098 ACCCACGCCTCTCGGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 56825156 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 56825157 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 56825210 Score = 159 bits (176), Expect = 5e-37 Identities = 166/211 (79%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| | Sbjct 56825415 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 56825472 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | || ||||||||| | ||||| ||||||| |||| | || Sbjct 56825473 CTCGTTGATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 56825532 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 |||| ||| ||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 56825533 ACCCACGCCTCTCGGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 56825591 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCT 209 |||| | ||||||| ||||||||||||||| Sbjct 56825592 AGCCCCGGACATCTAGGGGCATCACAGACCT 56825622 >seq1 Length=98476147 Score = 149 bits (164), Expect = 9e-34 Identities = 178/234 (76%), Gaps = 11/234 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || | |||||||| ||||| |||||||||| |||||| | Sbjct 29706063 GTACAAAGGGCAGGGACTTAAT----GCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 29706010 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||| |||| | || ||||||||| | ||||| ||||| | | || | ||| Sbjct 29706009 CTCATTGATGGGAAATAATTGCAATCCCCAATCCCTATCACAAGGGGGTTCAGCGGGTTA 29705950 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGCG 179 ||| ||| ||||| |||| ||||| || ||| | || ||||||| |||||| ||| Sbjct 29705949 CCCACGCCTCTCGGCGAAGGG--TAGACACGCTGA-TCCACTCAGTGTGGCGCGCTTGCA 29705893 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | ||||||||||||||||||||||| |||||| ||||| || ||||| Sbjct 29705892 GCCCCGGACATCTAAGGGCATCACAGACCTTTTATTG-CTCAATCTCGTGTGGC 29705840 >seq7 Length=63666967 Score = 96.9 bits (106), Expect = 5e-18 Identities = 74/85 (87%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||| ||| Sbjct 25103417 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAA-TTC 25103474 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||||| | || ||||||||| Sbjct 25103475 CTCGTTGATGGGAAATAATTGCAAT 25103499 >seq5 Length=70255127 Score = 93.3 bits (102), Expect = 6e-17 Identities = 93/117 (79%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 118 TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGT 176 |||||| ||| |||| |||| | | || || ||| | || ||||||| |||||||| Sbjct 12567971 TTACCCACGCCTCTCGGAGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGT 12567913 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 12567912 GCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 12567857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751957040355