Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq14 87.8 2e-15 seq390 84.2 2e-14 seq1 73.4 4e-11 >seq14 Length=44251975 Score = 87.8 bits (96), Expect = 2e-15 Identities = 127/176 (72%), Gaps = 4/176 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCT--TTGCTCGAATACATTACCATG 70 || |||||||||| ||| ||| ||||||||||||||| |||| |||||| | | | Sbjct 18931849 TTCACTTTGAAAACATTTGAGTGTTCAAAGCAGGCCTGGTTGCCTGAATACCGCAGCTAG 18931908 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGG-TTTCTAGGACCGCCCGTAATGA 129 |||| || ||||||||| | |||||| |||| || || ||||| || | | |||| Sbjct 18931909 GAATTATGGAATAGGAC-TCCGGTTCAATTTAGTGGGTTTTCTCTGAACTGGGGCCATGA 18931967 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 18931968 TTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 18932023 >seq390 Length=319786 Score = 84.2 bits (92), Expect = 2e-14 Identities = 80/100 (80%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||| ||||||| |||||||||||||| | || |||||| | | | Sbjct 27030 TTTACTTTGAAAAGATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCGCAGCTAG 27089 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110 ||||||| |||||| || | |||||||||||||| |||| Sbjct 27090 GAATAATGGAATAGCAC-TCCGGTTCTATTTTGTGTGTTT 27128 >seq1 Length=98476147 Score = 73.4 bits (80), Expect = 4e-11 Identities = 124/177 (70%), Gaps = 11/177 (6%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC--TTTGCTCGAATACATTACCATG 70 ||||||||||||||||||||| |||||||||||||| | || |||||| | | | Sbjct 29705170 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGTCGCCTGAATACCACAGCTAG 29705229 Query 71 GAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGG--TTTCTAGGACCGCCCGTAATG 128 ||||||| |||| | |||||||||||||| || ||||| || | | || Sbjct 29705230 GAATAAT------GGAC-TCCGGTTCTATTTTGTGGGGTTTTCTCTGAACTGAGGCCTTG 29705282 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || || | || | |||||| | ||||| | | |||||||||||||||| Sbjct 29705283 ATTAAGAGGGGCGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 29705339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511970750880