Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nothobranchius_20furzeri_20[refseq_20GCF_5F001465895.1_202015-12-11] 5,897 sequences; 1,242,518,059 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2 197 3e-48 seq10 188 1e-45 seq1 154 3e-35 seq7 109 1e-21 seq5 93.3 8e-17 >seq2 Length=88342039 Score = 197 bits (218), Expect = 3e-48 Identities = 201/258 (78%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 76936637 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 76936580 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | || || || | Sbjct 76936579 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCGTGTGTCTAC 76936520 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | || | | ||||| | ||||| | | |||| Sbjct 76936519 CCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 76936460 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | |||||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 76936459 CAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 76936400 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 76936399 AAGTCCCTGCCCTTTGTA 76936382 Score = 91.5 bits (100), Expect = 3e-16 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 124 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAG 183 |||||||||||||||| |||| | |||| |||||||| | ||||||| | || || | Sbjct 76935298 GTCTGTGATGCCCTTACATGTCCGGGGCAGCACGCGCACCACACTGAGTGGATCAGCGTG 76935239 Query 184 TTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243 | | | || |||| |||| ||||||| | | || | | ||||| | ||||| | Sbjct 76935238 TGTCTACCGTTCGCCGAGAGGTGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTG 76935179 Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGA 273 | |||||||||||| | | |||||||||| Sbjct 76935178 GGGATTGCAATTATTTCCCATCAACGAGGA 76935149 >seq10 Length=57197669 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 56825236 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 56825179 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | || || || | Sbjct 56825178 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCGTGTGTCTAC 56825119 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | || | | ||||| | ||||| | | |||| Sbjct 56825118 CCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 56825059 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 || ||||| | | ||||||||||||||| ||||| |||| ||||| || |||||||||| Sbjct 56825058 CAGTTATTTCCCATCAACGAGGAATGCCCAGTAATCGCGGGTCATAAGTTCGCGTTGATT 56824999 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 56824998 AAGTCCCTGCCCTTTGTA 56824981 Score = 170 bits (188), Expect = 4e-40 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACG 181 ||||||||||||||| ||||||| | |||| |||||||||| ||||||| | || || Sbjct 56825622 AGGTCTGTGATGCCCCTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCG 56825563 Query 182 AGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGAT 241 || | |||| |||| ||| ||||||| | | || | | ||||| | ||||| Sbjct 56825562 TGTGTCTACCCTTCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGAT 56825503 Query 242 AGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCAC 301 | | |||||||||||| | | |||||||||||| || |||||||||| ||||| ||| | Sbjct 56825502 TGGGGATTGCAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTC 56825443 Query 302 GCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||||||| |||||||||||||||| Sbjct 56825442 GCGTTGATTAAGTCCCTGCCCTTTGTA 56825416 >seq1 Length=98476147 Score = 154 bits (170), Expect = 3e-35 Identities = 193/258 (75%), Gaps = 10/258 (4%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||| | | ||| | |||| || | ||||| |||||| ||||||||| Sbjct 29705814 CTTCTTAGAGGGGCAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAAAAGGTCTGTG 29705871 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| ||| |||||| ||||||| | || || || | Sbjct 29705872 ATGCCCTTAGATGTCCGGGGCTGCAAGCGCGCCACACTGAGTGGATCAGCGTGT--CTAC 29705929 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| ||||||| | | | ||| | | ||| | ||||| | | |||| Sbjct 29705930 CCTTCGCCGAGAGGCGTGGGTAA-CCCGCTGAACCCCCTTGTGATAGGGATTGGGGATTG 29705988 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | |||| ||||||| || |||||||||| ||||| ||| ||| ||| Sbjct 29705989 CAATTATTTCCCATCAATGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGC----ATT 29706044 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 29706045 AAGTCCCTGCCCTTTGTA 29706062 >seq7 Length=63666967 Score = 109 bits (120), Expect = 1e-21 Identities = 79/90 (88%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 239 GATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298 ||||| | |||||||||||| | | |||||||||||| || |||||||||| ||||| || Sbjct 25103506 GATAGGG-ATTGCAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAG 25103448 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||||| |||||||||||||||| Sbjct 25103447 CTCGCGTTGATTAAGTCCCTGCCCTTTGTA 25103418 >seq5 Length=70255127 Score = 93.3 bits (102), Expect = 8e-17 Identities = 83/100 (83%), Gaps = 3/100 (3%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 12567831 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 12567888 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170 |||||||||||||| | |||| |||||||||| ||||||| Sbjct 12567889 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGA 12567928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947144143616