Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notothenia_20coriiceps_20[refseq_20GCF_5F000735185.1_202014-07-29] 38,657 sequences; 636,613,682 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21582 136 7e-30 >seq21582 Length=1143 Score = 136 bits (150), Expect = 7e-30 Identities = 182/245 (74%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT-TGCTCGAATACATTAGCATGGAAT 135 ||||||| |||||||| ||| |||||||| || | |||| ||||| | |||| | || Sbjct 592 ACTTTGAGAAAATTAGTGTGCTCAAAGCAAGCTTAATGCTTGAATAATGTTGCATAGGAT 533 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTT-CTAGGACCGCCGTAATGATTAAT 194 | |||||| | | ||||||| ||| |||||||| | | | | || ||||||||| Sbjct 532 GACGTAATAGGGCCT-CGGTTCTGTTTCGTTGGTTTACGAAAGCAGAGGTCATGATTAAT 474 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG-A 253 |||| || |||||| | ||||| || ||| |||||||||| || || | | Sbjct 473 CGGGACAGACGGGGGCATTCGTATTGTGGTGCTAGAAGTGAAATTCTGTGACC-ATCGCA 415 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| || ||||||||||| || ||||| |||||||||||||||| ||||||||||| Sbjct 414 AGACGGACAACTGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTT 356 Query 314 AGGGG 318 || || Sbjct 355 AGAGG 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914846211136