Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncorhynchus_20kisutch_20[refseq_20GCF_5F002021735.1_202017-03-06] 21,247 sequences; 2,369,932,239 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3 75.2 1e-11 >seq3 Length=70097442 Score = 75.2 bits (82), Expect = 1e-11 Identities = 139/194 (72%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| | | ||||||||| ||||||| ||| |||||| |||| Sbjct 10442729 AAACCCACAAAATAGAACCAGA-GTCCTATTCCGTTATTCCTAGCTGCGGTATTCAGGCG 10442671 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCAC 126 | ||||||||||||||||||||||| ||| ||||| | | | | || | | || Sbjct 10442670 ACCGGGCCTGCTTTGAACACTCTAATTTTTCCAAAGTAAACGCTTCGGACCCCGCGGGAC 10442611 Query 127 AC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCG 181 || || | ||| |||| ||| | | ||||| | |||||||| | | ||| |||| Sbjct 10442610 ACTCAGTTAAGAGCATCGAGGGGGCGCGGAGAGGCATGGGCTGGGACAGGTGGTAGCTCG 10442551 Query 182 CCGTGAGGCGGACC 195 || || |||||||| Sbjct 10442550 CCTTGCGGCGGACC 10442537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595077489798