Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncorhynchus_20mykiss_20[refseq_20GCF_5F002163495.1_202017-06-02] 131,961 sequences; 2,178,999,613 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value SEQ79201 77.0 5e-12 >SEQ79201 Length=707 Score = 77.0 bits (84), Expect = 5e-12 Identities = 86/111 (77%), Gaps = 7/111 (6%) Strand=Plus/Minus Query 169 CGAAC-TGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 ||||| |||||| ||||| |||||||||||||| ||| || ||| |||| ||||| | Sbjct 195 CGAACCTGTCTCACGACGGTCTGAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATC 136 Query 228 CAACCCTTGG-GAC--CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 |||| ||||| ||| || ||||| | | ||| || |||||||||||| Sbjct 135 CAACGCTTGGTGACTTCTGCTTCA---CAATGATAGGAAGAGCCGACATCG 88 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 779801846996