Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09]
7,189 sequences; 869,818,208 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq7169 172 8e-41
seq5063 172 8e-41
seq9 172 8e-41
seq18 84.2 3e-14
>seq7169
Length=826096
Score = 172 bits (190), Expect = 8e-41
Identities = 184/235 (78%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 540932 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 540875
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || ||||||| | | ||||| ||||||| |||| | ||
Sbjct 540874 CTCGTTGATGGGAAATAATTGCAGTCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 540815
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| ||||| ||| | | || || ||| | || ||||||| ||||||||||
Sbjct 540814 ACCCACGCCTCTCGGCGCAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 540756
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 540755 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 540702
>seq5063
Length=4665
Score = 172 bits (190), Expect = 8e-41
Identities = 184/235 (78%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 1830 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 1773
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || ||||||| | | ||||| ||||||| |||| | ||
Sbjct 1772 CTCGTTGATGGGAAATAATTGCAGTCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 1713
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| ||||| ||| | | || || ||| | || ||||||| ||||||||||
Sbjct 1712 ACCCACGCCTCTCGGCGCAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 1654
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1653 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 1600
>seq9
Length=33261919
Score = 172 bits (190), Expect = 8e-41
Identities = 184/235 (78%), Gaps = 6/235 (3%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 15806855 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 15806798
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||||| | || ||||||| | | ||||| ||||||| |||| | ||
Sbjct 15806797 CTCGTTGATGGGAAATAATTGCAGTCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 15806738
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| ||| ||||| ||| | | || || ||| | || ||||||| ||||||||||
Sbjct 15806737 ACCCACGCCTCTCGGCGCAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 15806679
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|||| | |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 15806678 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGTGTGGC 15806625
>seq18
Length=31847347
Score = 84.2 bits (92), Expect = 3e-14
Identities = 63/73 (86%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220
||||||| ||| |||| | |||| | |||||||||||||||||||||||||||||| |||
Sbjct 27129322 TCAGTGTGGCGTGCGTCCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 27129264
Query 221 AAACTTCCGTGGC 233
|| ||| |||||
Sbjct 27129263 AATCTTGTGTGGC 27129251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751947628135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |