Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09]
7,189 sequences; 869,818,208 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5063 154 6e-35
seq4148 127 9e-27
seq3 127 9e-27
seq18 122 4e-25
seq3111 118 4e-24
seq2875 114 5e-23
seq22 114 5e-23
seq17 113 2e-22
seq20 102 3e-19
seq2 91.5 6e-16
>seq5063
Length=4665
Score = 154 bits (170), Expect = 6e-35
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 3972 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 4031
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 4032 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4086
Score = 127 bits (140), Expect = 9e-27
Identities = 129/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| |||||| |||||||||||||||||| | || ||| |||||| | | |||||
Sbjct 3162 CCTTCTCGGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA 3221
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| |
Sbjct 3222 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAA 3281
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| | |||||||| || || ||||||| ||||| ||| || ||
Sbjct 3282 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 3329
>seq4148
Length=7495
Score = 127 bits (140), Expect = 9e-27
Identities = 129/168 (77%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| |||||| |||||||||||||||||| | || ||| |||||| | | |||||
Sbjct 2219 CCTTCTCGGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA 2278
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| |
Sbjct 2279 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAA 2338
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
||||| | |||||||| || || ||||||| ||||| ||| || ||
Sbjct 2339 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 2386
>seq3
Length=36486750
Score = 127 bits (140), Expect = 9e-27
Identities = 98/115 (85%), Gaps = 1/115 (1%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
||||| |||||||||||||||||| ||| |||| ||||| ||||||||||||| ||||
Sbjct 7236537 GGACCTGAAAGATGGTGAACTATGGCTGGGCAGGGCGAAGCTAGAGGAAACTCTGCTGGA 7236596
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||| ||| ||||||||||| | |||| | ||||||| |||||||
Sbjct 7236597 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTTGTCAGACCTGGGTAT-GGGGCGA 7236650
Score = 100 bits (110), Expect = 1e-18
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645
||| ||||||| ||| ||||||||||||||||||||||||||| ||||| ||| |||
Sbjct 4808880 AACCATGCCTGGTCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGTGGTCCTG 4808939
Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||| |||| | |||||||||||||||
Sbjct 4808940 ACGTGCAAATCAGTCGTATGACCTGGGTATAGGGGCGA 4808977
>seq18
Length=31847347
Score = 122 bits (134), Expect = 4e-25
Identities = 125/161 (78%), Gaps = 2/161 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTAAA 98
|||||| ||||||||||||||||| ||||| ||| |||||| | | ||||| ||||||
Sbjct 14689627 GAGTCGGGTTGTTTGGGAATGCAG-GCTAAAGCGGGTGGTAAACTCCATCTAAGGCTAAA 14689685
Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
|| ||| ||||||||||| ||||||| | | ||||| ||||||| |||||| |
Sbjct 14689686 TACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAACTTTGAA 14689745
Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 14689746 GAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 14689786
>seq3111
Length=13091
Score = 118 bits (130), Expect = 4e-24
Identities = 83/95 (87%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648
|||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||| ||
Sbjct 10523 TATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGGTCCTGACG 10464
Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||| ||||| | |||||||||||||||
Sbjct 10463 TGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 10429
>seq2875
Length=15199
Score = 114 bits (126), Expect = 5e-23
Identities = 86/101 (85%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
|||||||||||||| |||| ||||||||||||||||||||||||||| |||||| ||
Sbjct 7286 GTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCTGTC 7227
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||||| || || | |||| ||||||||||
Sbjct 7226 CTGACGTGCAAATCGGTCTTCCGACCTGGGCATAGGGGCGA 7186
>seq22
Length=28922466
Score = 114 bits (126), Expect = 5e-23
Identities = 122/160 (76%), Gaps = 1/160 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||||||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 20376214 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 20376273
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| | | |||| ||||||| || ||| |
Sbjct 20376274 ACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGAAAAGTTGAAAAGAAC-TTGAAG 20376332
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 20376333 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 20376372
>seq17
Length=31900967
Score = 113 bits (124), Expect = 2e-22
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628
|||||||||| || |||||||||||| |||| ||||||||| |||||||||||||
Sbjct 17492929 GGACCCGAAATTAGGGGAACTATGCCTGGGCAGGGCAAAGCCAGAGAAAACTCTGGTGGA 17492988
Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| ||||||||| | || |||||||| ||||| | |||||||||||||||
Sbjct 17492989 GGCCCGCAGCGGTCACGACGAGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 17493043
>seq20
Length=24844481
Score = 102 bits (112), Expect = 3e-19
Identities = 118/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91
||||| |||||| ||||| ||||||||||| | || || |||||| | | |||||
Sbjct 24838168 CCTTCTCGGAGTCGGGTTGTGTGGGAATGCAGACCAAAGCGGCTGGTAAACTCCATCTAA 24838227
Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151
|||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| |
Sbjct 24838228 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTTAGGGAAAGTTGAAAAGAA 24838287
Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGA 189
|||| ||||||||| || || ||||||| |||||
Sbjct 24838288 TTTTG--AAGAGAGTTCAAGAGAGCGTGAAACCGTTGA 24838323
>seq2
Length=27233252
Score = 91.5 bits (100), Expect = 6e-16
Identities = 72/85 (85%), Gaps = 1/85 (1%)
Strand=Plus/Minus
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG-AAACTCTGGTGGAGG 630
||||||||||||||| |||||| || |||| ||||||||||| |||||||| ||||||
Sbjct 25642428 CCCGAAAGATGGTGACCTATGCTTGGGCAGGGCGAAGCCAGAGGAAAACTCTGATGGAGG 25642369
Query 631 CTCGCAGCGGTTCTGGCGTGCAAAT 655
| | || |||||||| ||||| |||
Sbjct 25642368 CCCACAACGGTTCTGACGTGCTAAT 25642344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079845795950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |