Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09] 7,189 sequences; 869,818,208 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5063 154 6e-35 seq4148 127 9e-27 seq3 127 9e-27 seq18 122 4e-25 seq3111 118 4e-24 seq2875 114 5e-23 seq22 114 5e-23 seq17 113 2e-22 seq20 102 3e-19 seq2 91.5 6e-16 >seq5063 Length=4665 Score = 154 bits (170), Expect = 6e-35 Identities = 103/115 (90%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 3972 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 4031 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 4032 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4086 Score = 127 bits (140), Expect = 9e-27 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||| |||||| |||||||||||||||||| | || ||| |||||| | | ||||| Sbjct 3162 CCTTCTCGGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA 3221 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| | Sbjct 3222 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAA 3281 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||| | |||||||| || || ||||||| ||||| ||| || || Sbjct 3282 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 3329 >seq4148 Length=7495 Score = 127 bits (140), Expect = 9e-27 Identities = 129/168 (77%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||| |||||| |||||||||||||||||| | || ||| |||||| | | ||||| Sbjct 2219 CCTTCTCGGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAA 2278 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| | Sbjct 2279 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAA 2338 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 ||||| | |||||||| || || ||||||| ||||| ||| || || Sbjct 2339 CTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 2386 >seq3 Length=36486750 Score = 127 bits (140), Expect = 9e-27 Identities = 98/115 (85%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||| ||| |||| ||||| ||||||||||||| |||| Sbjct 7236537 GGACCTGAAAGATGGTGAACTATGGCTGGGCAGGGCGAAGCTAGAGGAAACTCTGCTGGA 7236596 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||| | |||| | ||||||| ||||||| Sbjct 7236597 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTTGTCAGACCTGGGTAT-GGGGCGA 7236650 Score = 100 bits (110), Expect = 1e-18 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 586 AACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTG 645 ||| ||||||| ||| ||||||||||||||||||||||||||| ||||| ||| ||| Sbjct 4808880 AACCATGCCTGGTCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGTGGTCCTG 4808939 Query 646 GCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| |||| | ||||||||||||||| Sbjct 4808940 ACGTGCAAATCAGTCGTATGACCTGGGTATAGGGGCGA 4808977 >seq18 Length=31847347 Score = 122 bits (134), Expect = 4e-25 Identities = 125/161 (78%), Gaps = 2/161 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAA-TGGGAGGTAAATTTCTTCTAAAGCTAAA 98 |||||| ||||||||||||||||| ||||| ||| |||||| | | ||||| |||||| Sbjct 14689627 GAGTCGGGTTGTTTGGGAATGCAG-GCTAAAGCGGGTGGTAAACTCCATCTAAGGCTAAA 14689685 Query 99 TATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158 || ||| ||||||||||| ||||||| | | ||||| ||||||| |||||| | Sbjct 14689686 TACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAACTTTGAA 14689745 Query 159 AAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 14689746 GAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 14689786 >seq3111 Length=13091 Score = 118 bits (130), Expect = 4e-24 Identities = 83/95 (87%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 589 TATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCG 648 |||||||| |||| ||||||||||||||||||||||||||| ||||||||| ||| || Sbjct 10523 TATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGGTCCTGACG 10464 Query 649 TGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| ||||| | ||||||||||||||| Sbjct 10463 TGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 10429 >seq2875 Length=15199 Score = 114 bits (126), Expect = 5e-23 Identities = 86/101 (85%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642 |||||||||||||| |||| ||||||||||||||||||||||||||| |||||| || Sbjct 7286 GTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCTGTC 7227 Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||||| || || | |||| |||||||||| Sbjct 7226 CTGACGTGCAAATCGGTCTTCCGACCTGGGCATAGGGGCGA 7186 >seq22 Length=28922466 Score = 114 bits (126), Expect = 5e-23 Identities = 122/160 (76%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 20376214 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 20376273 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| | | |||| ||||||| || ||| | Sbjct 20376274 ACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGAAAAGTTGAAAAGAAC-TTGAAG 20376332 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||||| ||| || || Sbjct 20376333 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 20376372 >seq17 Length=31900967 Score = 113 bits (124), Expect = 2e-22 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||| || |||||||||||| |||| ||||||||| ||||||||||||| Sbjct 17492929 GGACCCGAAATTAGGGGAACTATGCCTGGGCAGGGCAAAGCCAGAGAAAACTCTGGTGGA 17492988 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| | || |||||||| ||||| | ||||||||||||||| Sbjct 17492989 GGCCCGCAGCGGTCACGACGAGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 17493043 >seq20 Length=24844481 Score = 102 bits (112), Expect = 3e-19 Identities = 118/158 (75%), Gaps = 2/158 (1%) Strand=Plus/Plus Query 32 CCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAA 91 ||||| |||||| ||||| ||||||||||| | || || |||||| | | ||||| Sbjct 24838168 CCTTCTCGGAGTCGGGTTGTGTGGGAATGCAGACCAAAGCGGCTGGTAAACTCCATCTAA 24838227 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 |||||||| ||| ||||||||||| ||||||| | | ||||| ||||||| | Sbjct 24838228 GGCTAAATACCGGCACGAGACCGATAGTCGACAAGTACCTTTAGGGAAAGTTGAAAAGAA 24838287 Query 152 CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGA 189 |||| ||||||||| || || ||||||| ||||| Sbjct 24838288 TTTTG--AAGAGAGTTCAAGAGAGCGTGAAACCGTTGA 24838323 >seq2 Length=27233252 Score = 91.5 bits (100), Expect = 6e-16 Identities = 72/85 (85%), Gaps = 1/85 (1%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG-AAACTCTGGTGGAGG 630 ||||||||||||||| |||||| || |||| ||||||||||| |||||||| |||||| Sbjct 25642428 CCCGAAAGATGGTGACCTATGCTTGGGCAGGGCGAAGCCAGAGGAAAACTCTGATGGAGG 25642369 Query 631 CTCGCAGCGGTTCTGGCGTGCAAAT 655 | | || |||||||| ||||| ||| Sbjct 25642368 CCCACAACGGTTCTGACGTGCTAAT 25642344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079845795950