Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09]
7,189 sequences; 869,818,208 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq7169 86.0 4e-15
seq5063 86.0 4e-15
seq9 86.0 4e-15
seq23 77.0 2e-12
>seq7169
Length=826096
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 540972 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 540915
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 540914 TAAT-CAACGCGAGCT 540900
>seq5063
Length=4665
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1870 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1813
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 1812 TAAT-CAACGCGAGCT 1798
>seq9
Length=33261919
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 15806895 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 15806838
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 15806837 TAAT-CAACGCGAGCT 15806823
>seq23
Length=24375348
Score = 77.0 bits (84), Expect = 2e-12
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand=Plus/Plus
Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123
|| ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| |||
Sbjct 2951974 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCGAGC 2952031
Query 124 T 124
|
Sbjct 2952032 T 2952032
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300779727020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |