Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09] 7,189 sequences; 869,818,208 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq7169 87.8 2e-15 seq6765 86.0 7e-15 >seq7169 Length=826096 Score = 87.8 bits (96), Expect = 2e-15 Identities = 142/194 (73%), Gaps = 9/194 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 540134 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTCAGGCG 540076 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCAC 126 | ||||||||||||||||||||||| |||| ||||| | | | | || | | || Sbjct 540075 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGACCCCGCGGGAC 540016 Query 127 AC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCG 181 || || ||| |||| ||| | || ||||| | |||||||| | || ||| |||| Sbjct 540015 ACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTAGCTCG 539956 Query 182 CCGTGAGGCGGACC 195 || | |||||||| Sbjct 539955 CCTTTCGGCGGACC 539942 >seq6765 Length=2670 Score = 86.0 bits (94), Expect = 7e-15 Identities = 142/195 (73%), Gaps = 9/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||| ||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 574 AAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGTGGTATTCAGGCG 632 Query 70 TAAG--CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCAC 126 | ||||||||||||||||||||||| |||| ||||| | | | | || | | || Sbjct 633 ACCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGACCCCACGGGAC 692 Query 127 AC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCG 181 || || ||| |||| ||| | || ||||| | ||||||| | || ||| |||| Sbjct 693 ACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGAACAGGCGGTAGCTCG 752 Query 182 CCGTGAGGCGGACCA 196 || | ||||||||| Sbjct 753 CCTTTCGGCGGACCA 767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595158548226