Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oryzias_20latipes_20[refseq_20GCF_5F000313675.1_202007-05-09]
7,189 sequences; 869,818,208 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq7169 188 1e-45
seq5063 188 1e-45
seq9 188 1e-45
seq18 86.0 1e-14
>seq7169
Length=826096
Score = 188 bits (208), Expect = 1e-45
Identities = 199/258 (77%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 540676 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 540733
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||||||| | || || || |
Sbjct 540734 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCGTGTGTCTAC 540793
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| ||| ||||||| | | || | | ||||| | ||||| | | | ||
Sbjct 540794 CCTGCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGACTG 540853
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | |||||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 540854 CAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 540913
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 540914 AAGTCCCTGCCCTTTGTA 540931
>seq5063
Length=4665
Score = 188 bits (208), Expect = 1e-45
Identities = 199/258 (77%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 1574 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 1631
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||||||| | || || || |
Sbjct 1632 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCGTGTGTCTAC 1691
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| ||| ||||||| | | || | | ||||| | ||||| | | | ||
Sbjct 1692 CCTGCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGACTG 1751
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | |||||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 1752 CAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 1811
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 1812 AAGTCCCTGCCCTTTGTA 1829
>seq9
Length=33261919
Score = 188 bits (208), Expect = 1e-45
Identities = 199/258 (77%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 15806599 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACACGA-GATTGAG-CAATAACAGGTCTGTG 15806656
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||||||| | || || || |
Sbjct 15806657 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGTGGATCAGCGTGTGTCTAC 15806716
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| ||| ||||||| | | || | | ||||| | ||||| | | | ||
Sbjct 15806717 CCTGCGCCGAGAGGCGTGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGACTG 15806776
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | |||||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 15806777 CAATTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 15806836
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 15806837 AAGTCCCTGCCCTTTGTA 15806854
>seq18
Length=31847347
Score = 86.0 bits (94), Expect = 1e-14
Identities = 120/166 (72%), Gaps = 2/166 (1%)
Strand=Plus/Plus
Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164
||| ||||| |||||||||||||||||||||||||||||| | |||| | |||| ||| |
Sbjct 27129258 AAGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGGACGCACGCCA 27129316
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||| | || | || | ||| || | || ||||||| | | |||||
Sbjct 27129317 CACTGAGTGGATCAGTGTGTGTCTACCCTGCGCTGATAGACGTGGGTAA-CCCGCTAAAC 27129375
Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGA 270
| || || | ||||| | | | |||||||||| | | |||||||
Sbjct 27129376 CCACTCATGATAGGGATTGGGAACTGCAATTATTTCCCATCAACGA 27129421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947131905792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |