Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pampus_20argenteus_20[genbank_20GCA_5F000697985.1_202014-06-03] 298,139 sequences; 350,448,509 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq225911 141 2e-31 seq54510 95.1 2e-17 >seq225911 Length=852 Score = 141 bits (156), Expect = 2e-31 Identities = 185/250 (74%), Gaps = 12/250 (5%) Strand=Plus/Plus Query 49 CTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG 107 ||||| | ||||||| || ||| | ||||||||||||||||||||||||||||||| || Sbjct 607 CTGGGGG-GCCGGGG--CCCGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCGGG 663 Query 108 CC------TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATT 161 || ||| |||||| | ||| |||||||| ||||||||| | |||||||||| Sbjct 664 CCGCCCAACCTGCCTGAATACCTGAGCTAGGAATAATGGAATAGGAC-TCCGGTTCTATT 722 Query 162 TTGTTGGTTTCTAGG-ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTC 220 |||| ||||| | || ||| | |||||||| ||||| | |||||| | ||||| Sbjct 723 TTGTGGGTTTTTCGGAACCTGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTG 782 Query 221 AATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACC 280 | |||||||||||||||||| ||||| || | |||||||| || || Sbjct 783 CGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCC 842 Query 281 AAGGATGTTT 290 ||| |||||| Sbjct 843 AAGAATGTTT 852 >seq54510 Length=902 Score = 95.1 bits (104), Expect = 2e-17 Identities = 105/134 (78%), Gaps = 7/134 (5%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| ||| || | | | | | ||||||||| |||| | ||||||| Sbjct 571 ATGCTCTTAACTGAGTGTCCCGCGGGGTCCGAAGCATTTACTTTGGAAAAGT-AGAGTGT 629 Query 98 TCAAAGCAGGCC--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||||| | || |||||| |||| |||||||| ||||||||| | | || Sbjct 630 TCAAAGCAGGCCCGGTCGCCTGAATAC--TAGCTAGGAATAATGGAATAGGAC-TCCAGT 686 Query 156 TCTATTTTGTTGGT 169 |||||||||| ||| Sbjct 687 TCTATTTTGTGGGT 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912471431872