Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq688 118 2e-24 seq2 98.7 2e-18 >seq688 Length=34815 Score = 118 bits (130), Expect = 2e-24 Identities = 85/98 (87%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||| |||||||||||||||| |||||||||| ||||||| ||| |||||||| Sbjct 14808 GTCTTGTTTATTATCGGAATTAACCAAACAAATCACTTCACCAACGGAGAGGGGCCATGC 14867 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTG 256 ||||||||||| | |||||||| | ||||||||||||| Sbjct 14868 ACCACCACCCACAAAATCAAGACATAGCTATCAATCTG 14905 >seq2 Length=23155178 Score = 98.7 bits (108), Expect = 2e-18 Identities = 77/90 (86%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| |||| |||||||||| |||||||| ||| ||||| | ||||||| ||||||| Sbjct 3756467 GTCTGGTTCATTATCGGAATGAACCAGACCAAT---TCCACATA-TAAGAACAGCCATGC 3756412 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTA 248 ||||||||||| |||||||||| ||||||| Sbjct 3756411 ACCACCACCCACAGAATCAAGACAGAGCTA 3756382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796726476525