Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq14 80.6 2e-13 seq8 80.6 2e-13 seq683 71.6 8e-11 seq58 71.6 8e-11 >seq14 Length=13523219 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| ||||||||||| ||||||||||||||||||| Sbjct 3354110 CTCACTAAACCATC-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3354167 Query 109 TAATACAACGCAAGC 123 |||| |||| ||||| Sbjct 3354168 TAAT-CAACACAAGC 3354181 >seq8 Length=15448865 Score = 80.6 bits (88), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2573604 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 2573661 Query 109 TAATACAACGCAAGC 123 |||| ||| || ||| Sbjct 2573662 TAAT-CAAGGCCAGC 2573675 >seq683 Length=35015 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || | ||||||| ||||||||||| ||||||||||||||||||| Sbjct 10265 CTCACTAAACCATC-CAATAGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 10322 Query 109 TAATACAACGCAAGC 123 | || ||| || ||| Sbjct 10323 TGAT-CAAGGCCAGC 10336 >seq58 Length=1316619 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| || |||| || || |||||| ||||||||||| ||||||||||||||||||| Sbjct 1004947 CTCACCAAACCATC-CAATCAGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1004890 Query 109 TAATACAACGCAAGC 123 |||| ||| || ||| Sbjct 1004889 TAAT-CAAGGCCAGC 1004876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300773139500