Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Paralichthys_20olivaceus_20[refseq_20GCF_5F001970005.1_202017-01-24] 9,525 sequences; 643,911,827 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 219 3e-52 seq6597 132 4e-26 seq11 102 6e-17 seq45 89.7 4e-13 >seq14 Length=13523219 Score = 219 bits (242), Expect = 3e-52 Identities = 983/1532 (64%), Gaps = 73/1532 (5%) Strand=Plus/Minus Query 65417 TGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTG 65476 ||| | |||| || || ||||| |||||||| || | ||| ||||||||| ||| Sbjct 9107168 TGAGGGTTGACGATCTGAAACTCTCCGGACAGGACCCTGCGGGTGTAGATGTTGCTGGTG 9107109 Query 65477 ATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGA 65536 || || | ||| || ||||||| || || ||||| || || || || ||||| || Sbjct 9107108 TAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATCGGG 9107049 Query 65537 GCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAG 65596 || | || || ||| | || |||| | | | || || | || | |||| Sbjct 9107048 GCCAGCAGCAGGCTGTTCCTCACGCCGTGCTTGGCGATCTTTTCCTTCAGCAGCTTCCAG 9106989 Query 65597 TTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATA 65656 | ||||| ||| | | || | || | ||||| || | || ||| | || | Sbjct 9106988 TCCCACA--GGTCGGTGGGCGTCTTCTCC----CACATGTCGTACTGGAGGATGCCCTTG 9106935 Query 65657 CTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTG 65716 ||| | || | || | | | ||||| ||| ||| || || | ||||| Sbjct 9106934 CTGACAGGACAGCCTTCGTATGTCTCGTAGGGGCCCAACTCGGCTGCCAGCTCGCAGCTC 9106875 Query 65717 GTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCA 65776 | ||| || ||||| | || |||||||| || || | || || | ||||| Sbjct 9106874 GCCTCCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTCAGCAGCTGAGCCTCT 9106815 Query 65777 TCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATA 65836 ||| || | || || |||||||| || | |||||||| ||| || || || || Sbjct 9106814 GGGCTTTCAAAGGGGTAACGCATCAGGATGAAGGCGTCGGCCAAACCCTGGACGCCGATT 9106755 Query 65837 CCGATGGGACGATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGAT 65895 || || || | || ||| ||||| | | || ||||| || || |||||||| || || Sbjct 9106754 CCAATTGGCCTGTGGCGCTTGTTGGA-CTTATCAGCCTCGGGCACTGGGTAGTAGTTAAT 9106696 Query 65896 ATCGATAATGCGATTCAAATTGCGTGTC-ACCACATG---CACGATACGTCGCAATTGTT 65951 || || || |||| || | || | | || | ||| | || || || || || Sbjct 9106695 CTCTATGATCTTGTTCAGGTT-CTTGACGATAACTTTGGTCAC-AGAC-TC-CAGTTTTT 9106640 Query 65952 CGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAA 66011 ||| |||||| | || ||||| ||| || ||| ||| || || | Sbjct 9106639 TGAAGTCAAAA------GTCCGCTCGGGGGTGACGTACATG------TTGAGA---GCGA 9106595 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 || || || || ||||| || | ||| || | ||| || || || |||||||||| Sbjct 9106594 TGGAGGCCAGATTACAGACGGCGACCTCATCGTCACTGGTGTATTCAACGATTTCGGTGC 9106535 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 | || || ||||| |||||||| | ||||||||| || ||||| | ||||| || | Sbjct 9106534 AGAGGTTGCTGCATTTGATGGTGCCAAGATTCTGTTGGTTGCTCTTCCTGTTGCAGGCGT 9106475 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 | ||||||| ||||||||| || || ||||| |||||||| |||| ||||||||| | Sbjct 9106474 CTTTGTACAGCATGTACGGTGTACCCGTCTCCGTCTGGGACTCGATGACGGCGTGCCACA 9106415 Query 66192 GAGCGCGTGCCTTCAC----CGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAG 66247 | | |||||||| || | |||||| |||| || || || |||| Sbjct 9106414 GCTGCTGAGCCTTCACAACACGCTTGACCCGCCCCTCCTT----CTCATACTGGGTGTAG 9106359 Query 66248 AGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATC 66307 || | || || || ||||| ||| ||| | || |||| | ||||||||| Sbjct 9106358 AGCTTCTCAAACTCCTCCCCCCAGCACTCGTCCAGCCCGGGGCACTCGCTGGGACACATC 9106299 Query 66308 AGCGACCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGG 66365 || ||||| | || || ||| || | ||| || | || || ||||| | | Sbjct 9106298 AGAGACCAGT--CCTGGTTGCTCTCGACTCTCTTCATGAACAAGTCGGGGATCCACAAGC 9106241 Query 66366 CGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGG 66424 ||||||| ||||| | |||| ||||||||| | || ||| || || || || ||| Sbjct 9106240 CGTAGAAAAGATCTCTGGCTCTTTGCTCCTCCTTCCCTGTG-TTCTTCTTCAGCTCCAGG 9106182 Query 66425 AACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTG 66484 || ||||| | ||| |||||||| |||||||| |||||||| | || | ||| Sbjct 9106181 AAGTCAAACACGTCAAAGTGCCATGGCTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTG 9106122 Query 66485 CCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGC 66544 ||| || |||||||| ||||| || |||||| |||| | || ||| || || ||| Sbjct 9106121 TTGCCGCCCTGGTCGACATAGCGCGCCGTGTTGTTGTAGACTCTCAGCATGGGGACCAGC 9106062 Query 66545 CCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCG-TGCCCGTATATCGTGAAC 66603 ||||| || ||||| |||||||| | || | | ||| || || | || | || Sbjct 9106061 CCGTTTGAGTTGCCGTTGGTGCCAGCAAT-GTAGCTCCCCGTTGATCTGATGCAGCTGAC 9106003 Query 66604 ATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAA 66663 || || || || || || | ||| |||||| ||||| | || || | Sbjct 9106002 CGCCACGCCGATTCCTCCAGCTGACTTGGAGATGAGGGCACACTGCTTCAGCGTGTCATA 9105943 Query 66664 TATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGT 66721 |||||||| ||| |||| |||| ||||| || ||| |||| || || || || || Sbjct 9105942 AATGCCGTCGATGCTGTCATCCTTCATGGTGAGCAGGAAGCAGCTGGAC--AGCTGAGGC 9105885 Query 66722 TTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAAT--GGCGAGA-C 66778 || || | || |||||| || || | ||||| || || | | |||| | Sbjct 9105884 CTGTTGGTTCCTGCGTTGAAGAGCGTAGGAGACGCGTGGGTGAACCACTTCTCTGAGAGC 9105825 Query 66779 ATGTAATTGTACGTCTCGATGACAGCATCAA----TGTTTTCGCCATGAATCCCGAGTGC 66834 | | ||||| ||||||||| | || || | |||||| || || || | || Sbjct 9105824 AGG---TTGTAGGTCTCGATGGCGGCGTCGATAGCTGTTTT----GTGGATACCAACAGC 9105772 Query 66835 ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTA 66890 || ||| || | || || ||||| ||| ||| |||| ||||| | || | Sbjct 9105771 CACTCTCATGAGCATGTGCTGCGGCCGCTCGGCCACTTTGCCG----TTGATCTTCAGCA 9105716 Query 66891 AGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922 ||||||| || ||||| ||||||| |||||| Sbjct 9105715 AGTAGGAACGCTCCAGAGTCTTGAAGCCAAAG 9105684 >seq6597 Length=1954 Score = 132 bits (146), Expect = 4e-26 Identities = 103/123 (84%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || || ||||||| ||||| ||| | ||||| || |||||||| || ||||||| Sbjct 754 TGGAGCGCTTTACGCAGGAAGTGCAGGTGACCGAGGCCCGGTGTTTCTATGGTTTCCAGA 695 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| |||||||||||||||| || |||||||||| |||||||||| || Sbjct 694 TCGCCATGGAGAACATCCACTCGGAGATGTATAGCCTTCTCATCGACACGTACATCAAGG 635 Query 61376 AGC 61378 ||| Sbjct 634 AGC 632 >seq11 Length=13916851 Score = 102 bits (112), Expect = 6e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| || || || ||||||||||| ||| | |||||||||| |||||| || Sbjct 4879592 GTGTACTCCACTATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTCTGCTGG 4879533 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | ||||| || |||||||| | |||||| || || || || || || Sbjct 4879532 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTTCCCGTTTCTGTCTGT 4879473 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| |||||||| ||||| || | ||||||||| Sbjct 4879472 GACTCGATGATGGCATGCCACAGCTGCTGAGCCTTCACC 4879434 >seq45 Length=2253462 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || || || | |||||| |||||||||| ||| |||| | Sbjct 2025682 CAGGAGGTGCAGGTCCCCGAAGCTCGCTCCTTCTACAGCTTCCAGATCCTCATAGAGACT 2025623 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||||||||||||||| | |||||| | || ||||| ||||| Sbjct 2025622 GTTCACTCGGAGATGTACAGCATGCTCATCAACACTTACATTAGGGA 2025576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397521847946000