Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq7608 141 2e-31 seq14149 77.0 6e-12 >seq7608 Length=891 Score = 141 bits (156), Expect = 2e-31 Identities = 209/288 (73%), Gaps = 11/288 (4%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAG-CCAGGACTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| | | ||| | ||||||||||||||| | ||||| Sbjct 812 ATGCTCTTAGCTGAGTGTCCCGCAGGGTCCAAAGCGTTTACTTTGAAAAAAATT-AGTGT 754 Query 98 TCAAAGCAGGCCT--TTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGT 155 |||||||||| | | || |||||| ||| |||||||| ||||||||| | |||| Sbjct 753 TCAAAGCAGGTCCGGTCGCCTGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGT 695 Query 156 TCTATTTTGTTGGTTT----CTAGGACC-GCCGTAATGATTAATAGGGATAGTCGGGGGT 210 |||||||||| ||||| || || | | | |||||||| ||||| | |||||| Sbjct 694 TCTATTTTGTGGGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGC 635 Query 211 GTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAA 270 | ||||| | |||||||||||||||||| ||||| || | ||||| Sbjct 634 ATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACGAAAGCGAA 575 Query 271 AGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| || ||||| |||||||||||||||| |||||||||| || || Sbjct 574 AGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGTCAGAGG 528 >seq14149 Length=857 Score = 77.0 bits (84), Expect = 6e-12 Identities = 94/127 (74%), Gaps = 1/127 (1%) Strand=Plus/Plus Query 186 ATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA 245 |||||||| ||||| | |||||| | ||||| | |||||||||||||||||| Sbjct 487 ATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 546 Query 246 TTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAA 305 ||||| || | |||||||| || ||||| |||||||||||||||| ||| Sbjct 547 CCGGCGCAAGACGGACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAA 605 Query 306 CGAAAGT 312 ||||||| Sbjct 606 CGAAAGT 612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914772949376