Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq10915 149 3e-33 seq19805 104 1e-19 seq7796 98.7 4e-18 >seq10915 Length=8484 Score = 149 bits (164), Expect = 3e-33 Identities = 102/115 (89%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 2379 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 2320 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||| ||||| | ||||||||| ||||| Sbjct 2319 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGAGGCGA 2265 >seq19805 Length=169703 Score = 104 bits (114), Expect = 1e-19 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 42 GTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT 101 |||| ||||||||||||||| || | || || |||||| | | ||||| |||||||| Sbjct 3583 GTCGGGTTGTTTGGGAATGCGGCCCAAAGCGGATGGTAAACTCCATCTAAGGCTAAATAC 3642 Query 102 TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAG 161 |||| ||||||||||| ||||||| || | ||||| ||||||| |||||| | || Sbjct 3643 TGGCACGAGACCGATAGTCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTTGAAGAG 3702 Query 162 AGAGTTAAAAAG 173 | |||| || || Sbjct 3703 ACAGTTTAAGAG 3714 >seq7796 Length=21176 Score = 98.7 bits (108), Expect = 4e-18 Identities = 94/120 (78%), Gaps = 9/120 (8%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||||||||||||||||| |||||||| |||||||||||||||| |||| |||| ||| Sbjct 9797 GACCCGAAAGATGGTGAAAAATGCCTGAGCAGGGTGAAGCCAGAGG-AACTTTGGTAGAG 9855 Query 630 GCTCGCAGCG--------GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 || ||| | | | ||| ||||||||||||| ||| | ||||||||||||| Sbjct 9856 GCCCGCCGTGATCCTGATATCCTGACGTGCAAATCGATTGTCCGACCTGGGTATAGGGGC 9915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2078999100100