Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq10304 419 8e-115
seq26510 286 1e-74
seq18776 224 3e-56
seq44835 113 1e-22
seq14568 102 3e-19
seq9189 93.3 1e-16
seq41912 89.7 2e-15
seq6755 77.0 1e-11
>seq10304
Length=25844
Score = 419 bits (464), Expect = 8e-115
Identities = 301/342 (88%), Gaps = 5/342 (1%)
Strand=Plus/Plus
Query 175 CCGCTTCATTGATTAAGT-aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAA 232
|||| ||| || ||||| ||||||| | |||| ||||||||||||||| || |||||
Sbjct 307 CCGCCTCACTGGGTAAGTGAAAAAAATGGTAAGAGTAGTGGTATTTCACCGGCAGCCGAG 366
Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292
| || ||||||||||||||||||||| ||| |||||| | | ||||||||||||||
Sbjct 367 GC--CTTCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGC 424
Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 425 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 484
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
| || | |||||||||| |||||||||||| ||| ||||||||||||| |||| || |||
Sbjct 485 CAAGGTGGTAGATAGGGGCAGTGGGAATCTTGTTCATCCATTCATGCGTGTCATTATTTA 544
Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 545 GATGACGAGGCATTTGGCTACCTTCACAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 604
Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514
|| |||| |||||||||||||||||||||| | |||||||
Sbjct 605 TTCATTGAGTTTCTTCACTTTGACATTCAGAAC-TTGGGCAG 645
Score = 105 bits (116), Expect = 2e-20
Identities = 89/108 (82%), Gaps = 1/108 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| |||| || ||||||| || | |||| | |||||||||||||||||||
Sbjct 80 CTTCTGCTCCACAGCAGGTTTCTGTCCTTCCTGAGCTCGCCTTAGGACACCTGCGTTACT 139
Query 67 GTTTAACAGATGTGCCG-CCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| ||| |||||| ||||||||||||||| || ||||
Sbjct 140 GTTTGACAGGTGTACCGCCCCCAGTCAAACTCCCCACCTGCCACTGTC 187
>seq26510
Length=3136
Score = 286 bits (316), Expect = 1e-74
Identities = 167/173 (97%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2930 TAGATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGA 2989
Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480
||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||
Sbjct 2990 GGCATTTGGCTACCTTAAGAGAGTCATAGTTCCCCCCGCCGTTTACCCGCGCTTCATTGA 3049
Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3050 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 3102
>seq18776
Length=17081
Score = 224 bits (248), Expect = 3e-56
Identities = 129/132 (98%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15608 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 15549
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15548 TTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 15489
Query 522 ATTGCGTCAACA 533
|| |||||||||
Sbjct 15488 ATCGCGTCAACA 15477
>seq44835
Length=6000
Score = 113 bits (124), Expect = 1e-22
Identities = 104/129 (81%), Gaps = 7/129 (5%)
Strand=Plus/Plus
Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGT-----TTCGCTA 355
|||||||||||||||||||| |||||||| ||||||||||||| |||| | | ||
Sbjct 1949 TCTTCTTTCCCCGCTGATTCTGCCAAGCCAGTTCCCTTGGCTGATGGTACACATACTGTA 2008
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
| || || | ||| ||||||||||||||| ||||||||||| || ||| | ||||||
Sbjct 2009 G-GGGTTGACAAGGAAAGTGGGAATCTCGTTCATCCATTCATGTGCATCAATTTTTAGAT 2067
Query 416 GACGAGGCA 424
||| |||||
Sbjct 2068 GACAAGGCA 2076
>seq14568
Length=2799
Score = 102 bits (112), Expect = 3e-19
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67
|| ||||| || |||| ||||||| ||| |||| | ||||||||||||||| ||| |
Sbjct 1488 TTCTGCTCCACGGGAGGTTTCTGTCCTCTCTGAGCTCGCCTTAGGACACCTGCATTACTG 1547
Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| | | ||||||||| ||||||||||||||| || ||||
Sbjct 1548 TTTGACAGGTATACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 1593
>seq9189
Length=24358
Score = 93.3 bits (102), Expect = 1e-16
Identities = 107/143 (75%), Gaps = 12/143 (8%)
Strand=Plus/Plus
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||| || ||||||| ||| |||||||| ||||||| |||| ||||
Sbjct 20805 CAGGGTCTTCTTTCTCCACTGATTCTGCC-----CGTTCCCTCGGCTGTGTTTTCTCTAG 20859
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA-ATTAGAT 415
||| || |||| ||| |||| ||| | || |||| | ||| |||||||
Sbjct 20860 GGGGTAAATGAGGACGGTGCGAATGTCGATCATTATTTCA------ACGCTAGATTAGAT 20913
Query 416 GACGAGGCATTTGGCTACCTTAA 438
||||||||||||||| ||||||
Sbjct 20914 GACGAGGCATTTGGCCGCCTTAA 20936
>seq41912
Length=29106
Score = 89.7 bits (98), Expect = 2e-15
Identities = 75/92 (82%), Gaps = 5/92 (5%)
Strand=Plus/Minus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
|| |||||||| ||||||||| | |||| ||| | | | ||| |||||||||||||||
Sbjct 26772 ACTTTAAGAGAATCATAGTTAGCCTCGCCATTTTCACACACTTCATTGAATTTCTTCACT 26713
Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACAT 523
|||||||||||||| |||||||||||||
Sbjct 26712 TTGACATTCAGAGC-----GCAGAAATCACAT 26686
>seq6755
Length=97474
Score = 77.0 bits (84), Expect = 1e-11
Identities = 70/87 (80%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70
||||| || |||| ||||||| |||| ||| | |||||||||||||| |||| ||||
Sbjct 39352 TGCTCCACGGGAGGTTTCTGTCCTCCCAGAGCTCGCCTTAGGACACCTGTGTTACTGTTT 39411
Query 71 AACAGATGTGCCGCC-CCAGCCAAACT 96
|||| ||| ||||| |||| ||||||
Sbjct 39412 GACAGGTGTACCGCCACCAGTCAAACT 39438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1634436982976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |