Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq10304 419 8e-115 seq26510 286 1e-74 seq18776 224 3e-56 seq44835 113 1e-22 seq14568 102 3e-19 seq9189 93.3 1e-16 seq41912 89.7 2e-15 seq6755 77.0 1e-11 >seq10304 Length=25844 Score = 419 bits (464), Expect = 8e-115 Identities = 301/342 (88%), Gaps = 5/342 (1%) Strand=Plus/Plus Query 175 CCGCTTCATTGATTAAGT-aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAA 232 |||| ||| || ||||| ||||||| | |||| ||||||||||||||| || ||||| Sbjct 307 CCGCCTCACTGGGTAAGTGAAAAAAATGGTAAGAGTAGTGGTATTTCACCGGCAGCCGAG 366 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | || ||||||||||||||||||||| ||| |||||| | | |||||||||||||| Sbjct 367 GC--CTTCCACTTATTCTACACCTCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGC 424 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 425 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 484 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 | || | |||||||||| |||||||||||| ||| ||||||||||||| |||| || ||| Sbjct 485 CAAGGTGGTAGATAGGGGCAGTGGGAATCTTGTTCATCCATTCATGCGTGTCATTATTTA 544 Query 413 GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 472 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 545 GATGACGAGGCATTTGGCTACCTTCACAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC 604 Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAG 514 || |||| |||||||||||||||||||||| | ||||||| Sbjct 605 TTCATTGAGTTTCTTCACTTTGACATTCAGAAC-TTGGGCAG 645 Score = 105 bits (116), Expect = 2e-20 Identities = 89/108 (82%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| |||| || ||||||| || | |||| | ||||||||||||||||||| Sbjct 80 CTTCTGCTCCACAGCAGGTTTCTGTCCTTCCTGAGCTCGCCTTAGGACACCTGCGTTACT 139 Query 67 GTTTAACAGATGTGCCG-CCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| ||| |||||| ||||||||||||||| || |||| Sbjct 140 GTTTGACAGGTGTACCGCCCCCAGTCAAACTCCCCACCTGCCACTGTC 187 >seq26510 Length=3136 Score = 286 bits (316), Expect = 1e-74 Identities = 167/173 (97%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2930 TAGATAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGA 2989 Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 ||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||| Sbjct 2990 GGCATTTGGCTACCTTAAGAGAGTCATAGTTCCCCCCGCCGTTTACCCGCGCTTCATTGA 3049 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 3050 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 3102 >seq18776 Length=17081 Score = 224 bits (248), Expect = 3e-56 Identities = 129/132 (98%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15608 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 15549 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 15548 TTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 15489 Query 522 ATTGCGTCAACA 533 || ||||||||| Sbjct 15488 ATCGCGTCAACA 15477 >seq44835 Length=6000 Score = 113 bits (124), Expect = 1e-22 Identities = 104/129 (81%), Gaps = 7/129 (5%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTG-TGGT-----TTCGCTA 355 |||||||||||||||||||| |||||||| ||||||||||||| |||| | | || Sbjct 1949 TCTTCTTTCCCCGCTGATTCTGCCAAGCCAGTTCCCTTGGCTGATGGTACACATACTGTA 2008 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 | || || | ||| ||||||||||||||| ||||||||||| || ||| | |||||| Sbjct 2009 G-GGGTTGACAAGGAAAGTGGGAATCTCGTTCATCCATTCATGTGCATCAATTTTTAGAT 2067 Query 416 GACGAGGCA 424 ||| ||||| Sbjct 2068 GACAAGGCA 2076 >seq14568 Length=2799 Score = 102 bits (112), Expect = 3e-19 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 || ||||| || |||| ||||||| ||| |||| | ||||||||||||||| ||| | Sbjct 1488 TTCTGCTCCACGGGAGGTTTCTGTCCTCTCTGAGCTCGCCTTAGGACACCTGCATTACTG 1547 Query 68 TTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||| |||| | | ||||||||| ||||||||||||||| || |||| Sbjct 1548 TTTGACAGGTATACCGCCCCAGTCAAACTCCCCACCTGCCACTGTC 1593 >seq9189 Length=24358 Score = 93.3 bits (102), Expect = 1e-16 Identities = 107/143 (75%), Gaps = 12/143 (8%) Strand=Plus/Plus Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||| || ||||||| ||| |||||||| ||||||| |||| |||| Sbjct 20805 CAGGGTCTTCTTTCTCCACTGATTCTGCC-----CGTTCCCTCGGCTGTGTTTTCTCTAG 20859 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA-ATTAGAT 415 ||| || |||| ||| |||| ||| | || |||| | ||| ||||||| Sbjct 20860 GGGGTAAATGAGGACGGTGCGAATGTCGATCATTATTTCA------ACGCTAGATTAGAT 20913 Query 416 GACGAGGCATTTGGCTACCTTAA 438 ||||||||||||||| |||||| Sbjct 20914 GACGAGGCATTTGGCCGCCTTAA 20936 >seq41912 Length=29106 Score = 89.7 bits (98), Expect = 2e-15 Identities = 75/92 (82%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 || |||||||| ||||||||| | |||| ||| | | | ||| ||||||||||||||| Sbjct 26772 ACTTTAAGAGAATCATAGTTAGCCTCGCCATTTTCACACACTTCATTGAATTTCTTCACT 26713 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||||||||||| ||||||||||||| Sbjct 26712 TTGACATTCAGAGC-----GCAGAAATCACAT 26686 >seq6755 Length=97474 Score = 77.0 bits (84), Expect = 1e-11 Identities = 70/87 (80%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70 ||||| || |||| ||||||| |||| ||| | |||||||||||||| |||| |||| Sbjct 39352 TGCTCCACGGGAGGTTTCTGTCCTCCCAGAGCTCGCCTTAGGACACCTGTGTTACTGTTT 39411 Query 71 AACAGATGTGCCGCC-CCAGCCAAACT 96 |||| ||| ||||| |||| |||||| Sbjct 39412 GACAGGTGTACCGCCACCAGTCAAACT 39438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634436982976