Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014- 12-02] 46,662 sequences; 679,761,122 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq22243 105 2e-20 seq6227 104 7e-20 >seq22243 Length=59116 Score = 105 bits (116), Expect = 2e-20 Identities = 91/108 (84%), Gaps = 6/108 (6%) Strand=Plus/Minus Query 400 AAAC-GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA--TTGCTTATACT 456 |||| || || ||||||| |||||||| |||||||||||||| | ||| | |||| Sbjct 17445 AAACTGAGAATTGATTTATGGAGCCATTTGCAGTTTCACTGTACCGGCCTTG--TGTACT 17388 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| ||||||||||||||||||||||||||||||| | |||||||| Sbjct 17387 TAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CCACTGGCAG 17341 >seq6227 Length=63287 Score = 104 bits (114), Expect = 7e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 392 TATCAAATAAACGATA-ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCT 450 |||| || |||| || | ||| ||||||||||| |||||||||||||| | | Sbjct 61418 TATCCAAGCAACGTTAGAGCGATCAAATGAGCCATTTGCAGTTTCACTGTACCGGCCGTG 61359 Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||| ||||| ||||||||||||||||||||||||| |||||||||| Sbjct 61358 TGTACTTAGACTTGCATAGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 61306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1509695217152