Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmodon_20schlosseri_20[genbank_20GCA_5F000787095.1_202014-
12-02] 46,662 sequences; 679,761,122 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11038 217 1e-51
seq5499 120 2e-22
seq15624 102 6e-17
>seq11038
Length=78219
Score = 217 bits (240), Expect = 1e-51
Identities = 446/658 (68%), Gaps = 4/658 (1%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|||||||| ||||| || ||||||| |||||||| ||||||||||||||||| ||
Sbjct 22827 GTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGG 22886
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|||||||| | || || ||||| ||||||| |||||| || || || || || ||
Sbjct 22887 TTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCTGTTTCTGTCTGA 22946
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGC-GTGCCTTCACCGTACGTACCGCCCTACCTTT 66228
||||| |||||||| | ||| | | || | ||||| ||| || | | ||||| |
Sbjct 22947 GACTCGATGATGGCATACCACA-ACTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTC 23005
Query 66229 GCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGG 66288
|||| || || |||||| | || || || ||||| || || | ||
Sbjct 23006 CTGTTCATATTGAGTGTAGAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGG 23065
Query 66289 ACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAG 66348
|||| || |||||||| ||||| || | | ||| || | ||| || ||
Sbjct 23066 GCACTCACTGGGGCACATCAGAGACCAGTCCTGGTTGTTTTCCACCCTCTTCATGAACAG 23125
Query 66349 ATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGAT 66407
|||||| ||||| ||||| |||||||| || ||||| | |||||||| | || ||| |
Sbjct 23126 ATCAGGGATCCATAGGGCATAGAAGAGGTCTCGTGCCCTCTGCTCCTCTTTACCAGTG-T 23184
Query 66408 TTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGA 66467
| || || || ||||| ||||| | || |||||||| |||||||| ||||| |
Sbjct 23185 TCTTCTTCAGCTCAAGGAAGTCAAACACATCAAAGTGCCATGGCTCCAGGTATATGGCAA 23244
Query 66468 ACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACAC 66527
| | ||| ||||| |||||||||||| |||||||| ||| |||||| | || |
Sbjct 23245 AAGCACCCGGTCGTTTATTGCCACCTTGGTCCACGTAGCGTGCGGTGTTGTTGTACACTC 23304
Query 66528 GCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTG 66587
|| |||||| || || || || || || ||||| || || | ||| ||| ||
Sbjct 23305 TCAGCATCGGCACAAGGCCATTTGAGTTACCATTTGTTCCAGCAATGTAACTACCTGTTG 23364
Query 66588 CCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAAT 66647
| ||| | ||| | |||||| || || || | || |||||| |||||| |
Sbjct 23365 ATCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATGAGAGCACATT 23424
Query 66648 CGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA 66705
| ||| | ||||| |||||| |||| |||| |||| ||| ||| ||||
Sbjct 23425 GTTTGAGTGTATCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCA 23482
>seq5499
Length=1901
Score = 120 bits (132), Expect = 2e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| ||| |||||||| || |||||||||| || |||||||| |||||||
Sbjct 1527 TGGAGCGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTACGGGTTCCAGA 1586
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| || |||||||| ||||||||||||||||||| | |||||||| || || |||| ||
Sbjct 1587 TCGCGATGGAGAACATCCACTCGGAGATGTACAGCCTGCTCATCGACACCTATATCAAGG 1646
Query 61376 A 61376
|
Sbjct 1647 A 1647
>seq15624
Length=12484
Score = 102 bits (112), Expect = 6e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| || || ||||| || |||||||| || ||| | |||||||| | |||||| ||
Sbjct 11852 GTGTATTCTACAATCTCAGTGCACAGGTTGCTGGATTTGATGGTGCCTAGATTCTGCTGG 11911
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||||| | |||||||||||| ||||| | |||||| || || || ||||| ||
Sbjct 11912 TTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGT 11971
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|||||||| ||||| | ||| || | |||||||||
Sbjct 11972 GACTCAATAATGGCATACCACAGCTGCTGGGCCTTCACC 12010
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397341905811680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |