Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq21970 176 7e-42
>seq21970
Length=5753
Score = 176 bits (194), Expect = 7e-42
Identities = 172/215 (80%), Gaps = 5/215 (2%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||| || ||||||||||||| ||||| |||||||||| |||||| |
Sbjct 914 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTT-ATGACCCGCGCTTACTGGGAATT-C 857
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119
|||||| | | || ||||||||| | ||||| ||||||| |||| | ||
Sbjct 856 CTCGTTCATGGGAAATAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 797
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178
|||| | ||| |||||||||| | | || || ||| | || ||||||| ||||||||||
Sbjct 796 ACCCAGGCCTCTCGGCCAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 738
Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 213
|||| | |||||||||||||||||||||||||||
Sbjct 737 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751810152900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |