Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq23706 73.4 2e-11 seq19347 71.6 8e-11 >seq23706 Length=272567 Score = 73.4 bits (80), Expect = 2e-11 Identities = 87/117 (74%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||| |||| |||| |||| || | | |||| | | |||| ||||| |||| Sbjct 211699 GAACCCCAAGAGTTTGCTTTCACGGACGTTGCCCGGTGGGTCACGGGAATAACGCCGCCG 211758 Query 61 GATCCCTAGTC--GGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||| ||||| ||||| ||||| ||| | |||| |||||||||||||||| ||| Sbjct 211759 GATCGCTAGTTTTGGCATCGTTTATGGTCAGAACTATGACGGTATCTGATCGTTTTC 211815 >seq19347 Length=21655 Score = 71.6 bits (78), Expect = 8e-11 Identities = 53/62 (85%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 |||| |||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||| Sbjct 4714 CGCCGGATCGCTAGTTGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTC 4655 Query 116 GA 117 || Sbjct 4654 GA 4653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278331983400