Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq23706 73.4 2e-11
seq19347 71.6 8e-11
>seq23706
Length=272567
Score = 73.4 bits (80), Expect = 2e-11
Identities = 87/117 (74%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||| |||| |||| |||| || | | |||| | | |||| ||||| ||||
Sbjct 211699 GAACCCCAAGAGTTTGCTTTCACGGACGTTGCCCGGTGGGTCACGGGAATAACGCCGCCG 211758
Query 61 GATCCCTAGTC--GGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||| ||||| ||||| ||||| ||| | |||| |||||||||||||||| |||
Sbjct 211759 GATCGCTAGTTTTGGCATCGTTTATGGTCAGAACTATGACGGTATCTGATCGTTTTC 211815
>seq19347
Length=21655
Score = 71.6 bits (78), Expect = 8e-11
Identities = 53/62 (85%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|||| |||| ||||| ||||| ||||| ||| |||||||||||||||||||||||||
Sbjct 4714 CGCCGGATCGCTAGTTGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTC 4655
Query 116 GA 117
||
Sbjct 4654 GA 4653
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278331983400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |