Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21970 123 5e-26 >seq21970 Length=5753 Score = 123 bits (136), Expect = 5e-26 Identities = 153/204 (75%), Gaps = 9/204 (4%) Strand=Plus/Plus Query 50 TGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 108 || |||| ||| || | | | | | ||||||||||||||||||||||||||||||||||| Sbjct 1 TGAGTGTCCCGCGGGGTCCGAAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGC 60 Query 109 C--TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTT 166 | | || |||||| ||| |||||||| ||||||||| | |||||||||||||| Sbjct 61 CCGGTCGCCTGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTG 119 Query 167 GG-TTTCT----AGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCA 221 || ||||| | || | | |||||||| ||||| | |||||| | ||||| Sbjct 120 GGTTTTCTTCTCTGAACTGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGT 179 Query 222 ATTGTCAGAGGTGAAATTCTTGGA 245 | |||||||||||||||||| Sbjct 180 GCCGCTAGAGGTGAAATTCTTGGA 203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914961498880