Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq25088 134 6e-30 seq21970 134 6e-30 seq500 77.0 1e-12 seq16486 75.2 5e-12 >seq25088 Length=293934 Score = 134 bits (148), Expect = 6e-30 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 6504 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 6445 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| || | | ||||| |||| |||||||||| Sbjct 6444 CCGAATCCCCGTCCGACAGGCGGGCGTGGGAAATGTGGCGTA 6403 >seq21970 Length=5753 Score = 134 bits (148), Expect = 6e-30 Identities = 91/102 (89%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 2272 GGAAAAGAAACTAACCAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 2331 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| || | | ||||| |||| |||||||||| Sbjct 2332 CCGAATCCCCGTCCGACAGGCGGGCGTGGGAAATGTGGCGTA 2373 >seq500 Length=204147 Score = 77.0 bits (84), Expect = 1e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 33 CGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGAC 92 ||| ||| ||| ||||||||||||||||||||||||||| || | | ||||| |||| Sbjct 77698 CGGTGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCCCCGTCCGACAGGCGGGCGTGGGAA 77639 Query 93 ATGTGGCGTA 102 |||||||||| Sbjct 77638 ATGTGGCGTA 77629 >seq16486 Length=209 Score = 75.2 bits (82), Expect = 5e-12 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 37 GAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGT 96 ||| ||| ||||||||||||||||||||||||||| || | | ||||| |||| |||| Sbjct 1 GAGCGAAGAGGGAAGAGCCCAGCGCCGAATCCCCGTCCGACAGGCGGGCGTGGGAAATGT 60 Query 97 GGCGTA 102 |||||| Sbjct 61 GGCGTA 66 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230343710400