Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq23706 102 1e-19 seq14046 98.7 2e-18 seq21664 84.2 3e-14 seq21970 78.8 1e-12 >seq23706 Length=272567 Score = 102 bits (112), Expect = 1e-19 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | || | ||||||||| ||||||||| ||||||||| || |||| Sbjct 211556 CTAGTTAGCACGCTGGAGTTTTGTTCGTTATTGGAATTAACGAGACAAATCGCTTCACCG 211615 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 || ||||||||||| ||||| ||||| |||||| |||||||||| Sbjct 211616 ACGAAGAACGGCCACGCACCGCCACCAGCAGAATCGAGAAAGAGCT 211661 >seq14046 Length=1186612 Score = 98.7 bits (108), Expect = 2e-18 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||| || Sbjct 1088580 GTCTTGTTCGCTATTGGAATTAACCAGACAAATAGCTCCACCAACTAAGAACGGCCAAGC 1088639 Query 219 ACCACCACC 227 ||||||||| Sbjct 1088640 ACCACCACC 1088648 >seq21664 Length=1540000 Score = 84.2 bits (92), Expect = 3e-14 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | | |||||| ||||||||||||||||||||||||| |||||||| Sbjct 226832 CTAGTTAGCATGCTGGAGCCTCGTTTGTTATCGGAATTAACCAGACAAATCGCTCCACCA 226891 Query 202 ACTAAGAACGGCCATG 217 | |||||||| |||| Sbjct 226892 TCCAAGAACGGTCATG 226907 >seq21970 Length=5753 Score = 78.8 bits (86), Expect = 1e-12 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 68 ||||||| |||||||||| |||| | ||||||||||||||||||||||||||| Sbjct 755 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796598842860