Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq23706 102 1e-19
seq14046 98.7 2e-18
seq21664 84.2 3e-14
seq21970 78.8 1e-12
>seq23706
Length=272567
Score = 102 bits (112), Expect = 1e-19
Identities = 86/106 (81%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | || | ||||||||| ||||||||| ||||||||| || ||||
Sbjct 211556 CTAGTTAGCACGCTGGAGTTTTGTTCGTTATTGGAATTAACGAGACAAATCGCTTCACCG 211615
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
|| ||||||||||| ||||| ||||| |||||| ||||||||||
Sbjct 211616 ACGAAGAACGGCCACGCACCGCCACCAGCAGAATCGAGAAAGAGCT 211661
>seq14046
Length=1186612
Score = 98.7 bits (108), Expect = 2e-18
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||| ||
Sbjct 1088580 GTCTTGTTCGCTATTGGAATTAACCAGACAAATAGCTCCACCAACTAAGAACGGCCAAGC 1088639
Query 219 ACCACCACC 227
|||||||||
Sbjct 1088640 ACCACCACC 1088648
>seq21664
Length=1540000
Score = 84.2 bits (92), Expect = 3e-14
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | | |||||| ||||||||||||||||||||||||| ||||||||
Sbjct 226832 CTAGTTAGCATGCTGGAGCCTCGTTTGTTATCGGAATTAACCAGACAAATCGCTCCACCA 226891
Query 202 ACTAAGAACGGCCATG 217
| |||||||| ||||
Sbjct 226892 TCCAAGAACGGTCATG 226907
>seq21970
Length=5753
Score = 78.8 bits (86), Expect = 1e-12
Identities = 49/53 (92%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTA 68
||||||| |||||||||| |||| | |||||||||||||||||||||||||||
Sbjct 755 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTA 703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796598842860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |