Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201 4-12-02] 26,060 sequences; 701,696,780 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq23883 163 9e-38 seq21355 104 7e-20 >seq23883 Length=1467417 Score = 163 bits (180), Expect = 9e-38 Identities = 135/160 (84%), Gaps = 5/160 (3%) Strand=Plus/Plus Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACG 404 |||||| |||||||||| |||| |||||||| ||| || || | |||||| ||| Sbjct 2439 TGTATTT-CTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAG-CGATCAAAGGAACC 2496 Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 ||||||||||||||||||||||||||||||||||||| | | | ||||||||| || Sbjct 2497 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACTTG 2556 Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||| |||||||||| Sbjct 2557 CATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 2595 >seq21355 Length=7998 Score = 104 bits (114), Expect = 7e-20 Identities = 86/104 (83%), Gaps = 6/104 (6%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||| |||||||| |||||||||||||| | | | |||||||| Sbjct 1188 AACCATAACTGAT-----GAGCCATTTGCAGTTTCACTGTACCGGCCGTGTGTACTTAGA 1242 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | |||||||||||||||||||||| |||||||| |||||||||| Sbjct 1243 CTTGCATGGCTTAATCTTTGAGACGAGCATATG-CTACTGGCAG 1285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510006389760