Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq23883 163 9e-38
seq21355 104 7e-20
>seq23883
Length=1467417
Score = 163 bits (180), Expect = 9e-38
Identities = 135/160 (84%), Gaps = 5/160 (3%)
Strand=Plus/Plus
Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTA--GTAAGGTACTATCAAATAAACG 404
|||||| |||||||||| |||| |||||||| ||| || || | |||||| |||
Sbjct 2439 TGTATTT-CTCTAGAATTGCCACAGTTATCCAAGTAACGTGAGAG-CGATCAAAGGAACC 2496
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
||||||||||||||||||||||||||||||||||||| | | | ||||||||| ||
Sbjct 2497 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACTTG 2556
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||| ||||||||||
Sbjct 2557 CATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 2595
>seq21355
Length=7998
Score = 104 bits (114), Expect = 7e-20
Identities = 86/104 (83%), Gaps = 6/104 (6%)
Strand=Plus/Plus
Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460
||| ||||||||| |||||||| |||||||||||||| | | | ||||||||
Sbjct 1188 AACCATAACTGAT-----GAGCCATTTGCAGTTTCACTGTACCGGCCGTGTGTACTTAGA 1242
Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| |||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1243 CTTGCATGGCTTAATCTTTGAGACGAGCATATG-CTACTGGCAG 1285
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510006389760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |