Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq18889 192 5e-44
seq20084 111 1e-19
seq22773 102 6e-17
>seq18889
Length=1054283
Score = 192 bits (212), Expect = 5e-44
Identities = 571/876 (65%), Gaps = 6/876 (1%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|||||||| ||||| || ||||||| |||||||| ||||||||||||||||| ||
Sbjct 964656 GTATACTCCACAATCTCAGTGCACAAGTTACTGCATTTGATGGTGCCCAAATTCTGCTGG 964715
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|||||||| | || || ||||| ||||||| |||||| || || || || || ||
Sbjct 964716 TTACTCTTCCTGTTACAGGCATCTTTGTACAACATGTAAGGTGTTCCCGTTTCTGTCTGA 964775
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229
||||| |||||||| | ||| | | ||||| ||| || | | ||||| |
Sbjct 964776 GACTCTATGATGGCATACCACACCTGCTGAGCCTTGACCACCCGCTTCACTCTACCCTCC 964835
Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289
|||| || || ||| || | || || || ||||| || || | ||
Sbjct 964836 TGTTCATATCGTGTGTACAGCTTCTCAAACTCCTCCCCCCAACACTCATCCAACCCAGGG 964895
Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349
|||| |||||||||| ||||| || | | ||| || | ||| || ||
Sbjct 964896 CACTCACTGGGACACATCAAAGACCAGTCCTGGTTGTTTTCCACTCTCTTCATGAACAGG 964955
Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATT 66408
||||| ||||| ||||| |||||||| || || || | |||||||| | || ||| ||
Sbjct 964956 TCAGGGATCCATAGGGCATAGAAGAGGTCTCGCGCCCTCTGCTCCTCTTTACCAGTG-TT 965014
Query 66409 TTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAA 66468
|| || || || || ||||| | || |||||||| |||| ||| ||||| ||
Sbjct 965015 CTTCTTCAGCTCAAGAAAGTCAAACACATCAAAGTGCCATGGCTCCAAGTAAATGGCAAA 965074
Query 66469 CGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACG 66528
| ||| ||||| |||||||||||| || ||||| || |||||| | || |
Sbjct 965075 GGCACCCGGTCGTTTATTGCCACCTTGGTCCACATAGCGTGCAGTGTTGTTGTACACTCT 965134
Query 66529 CAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGC 66588
|| |||||| || || || || || || ||||| || || | ||| |||| ||
Sbjct 965135 CAGCATCGGCACAAGACCATTTGAGTTACCATTTGTTCCAGCAATGTAACTTCCTGTTGA 965194
Query 66589 CCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648
| ||| | ||| | |||||| || || || | || ||||| |||||| |
Sbjct 965195 TCTAATACAGCTAACTGCTACACCAATCCCTCCTGCAGATTTAGAGATAAGAGCACATTG 965254
Query 66649 GGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--T 66706
|| ||| | ||||| |||||| |||| |||| |||| ||| ||| |||| |
Sbjct 965255 TTTCAGTGTGTCATAAATGCCATCAATGCTGTCATCCTTCATGGCCAGCAGGAAGCAGCT 965314
Query 66707 GAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAG 66766
| | || |||||| || ||| | || ||| || ||||| | || || || ||
Sbjct 965315 GGA--GAGCTGGGGTCTGTTAGTGCCTGCGTTGAACAGAGTGGGAGAGGCATGAGTGAAC 965372
Query 66767 TAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATC 66826
| | ||||| ||||| ||||| ||| | ||||| || | | || ||
Sbjct 965373 CACTTCTCAGACAGCAGGTTGTAGGTCTCAATGGCTGCATCTATATCAGAGTTGTGGATT 965432
Query 66827 CCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGC 66886
|||| || || ||| || | || || || || || ||| | | ||||| | |
Sbjct 965433 CCGACAGCTACTCTCATGAGCATGTGCTGTGGGCGCTCAGCCACTTTACCATTGATTTTC 965492
Query 66887 ATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAG 66922
| ||||| ||||| || || || || | ||||||
Sbjct 965493 AGCAAGTAAGAGCGCTCTAGCGTTTTAAAGCCAAAG 965528
>seq20084
Length=15297
Score = 111 bits (122), Expect = 1e-19
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| ||| |||||||| || |||||||||| || ||||| || |||||||
Sbjct 13233 TGGAGCGCTTCATGCAAGAGGTGCAGGTAACGGAGGCGCGCTGCTTCTATGGATTCCAGA 13174
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| || |||||||| ||||||| ||||||||||| | |||||||| || || |||| ||
Sbjct 13173 TCGCAATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTATATCAAGG 13114
Query 61376 A 61376
|
Sbjct 13113 A 13113
>seq22773
Length=730387
Score = 102 bits (112), Expect = 6e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| || || ||||| || |||||||| || ||| | |||||||| | |||||| ||
Sbjct 300296 GTGTATTCTACAATCTCAGTGCACAGGTTGCTGGACTTGATGGTGCCTAGATTCTGCTGG 300355
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||||| | |||||||||||| ||||| | |||||| || || || ||||| ||
Sbjct 300356 TTGCTCTTCCTATTGCATGCATCTTTGTAGAGCATGTATGGGGTACCCGTCTCTGTCTGT 300415
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|||||||| ||||| | ||| || | |||||||||
Sbjct 300416 GACTCAATAATGGCATACCACAGCTGCTGGGCCTTCACC 300454
Score = 84.2 bits (92), Expect = 2e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387
||| ||||| |||||| ||||| || ||||| || || | || |||||||| ||||
Sbjct 300720 TTCCACACGTTTCATAAAAAGATCTGGGATCCACAGAGCAAAAAACAGATCGCGGGCTCT 300779
Query 66388 TTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446
|||||||| | || ||| ||||| ||||| ||||||||||| | || |||||
Sbjct 300780 CTGCTCCTCTTTACCAGTG-TTTTTCTTTAAGTCAAGGAACTCAAACACATCAAAATGCC 300838
Query 66447 ATGGTTCCAGGTAGA 66461
|||| || |||||||
Sbjct 300839 ATGGCTCGAGGTAGA 300853
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397441729918400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |