Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_031903.1
Length=172345
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 601 4e-167
seq25415 560 1e-154
>seq21827
Length=6214
Score = 601 bits (666), Expect = 4e-167
Identities = 711/960 (74%), Gaps = 2/960 (0%)
Strand=Plus/Plus
Query 159830 AACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACT 159889
||||| || || | || ||||| || || |||||||||| || | ||| | ||||||
Sbjct 5058 AACCGTCTTTACATTGGATGGTTTGGTGTTTTGATGATCCCTACCTTATTGACCGCAACT 5117
Query 159890 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGA 159948
|||| || || |||| ||||| ||||| || || || || || ||||| || |||||
Sbjct 5118 -TCTGTATTTATTATCGCTTTCATTGCTGCCCCTCCGGTAGATATTGATGGTATTCGTGA 5176
Query 159949 ACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 160008
||| || |||| || || | || || ||||| || || |||||||| || |||| |
Sbjct 5177 ACCTGTTTCTGGATCTCTACTTTATGGAAACAATATTATTTCTGGTGCCATTATTCCTAC 5236
Query 160009 TTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTG 160068
||| || || ||| | || || || || || |||||||| || || | || || ||
Sbjct 5237 TTCTGCAGCGATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCTTCCGTTGATGAATG 5296
Query 160069 GCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGC 160128
| | || || |||||||||| | || | || | ||||| | | || | |
Sbjct 5297 GTTATACAATGGTGGTCCTTATGAGCTAATTGTTCTACACTTTTTACTTGGTGTAGCTTG 5356
Query 160129 CTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGT 160188
||||||||||||||||||||||| || |||||| |||||||| || ||||| |||
Sbjct 5357 TTATATGGGTCGTGAGTGGGAACTTAGTTTCCGTCTGGGTATGCGCCCTTGGATTGCTGT 5416
Query 160189 TGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCA 160248
|||||| || ||||| || || |||||| ||||||| ||| | |||| || | |||||
Sbjct 5417 TGCATATTCAGCTCCTGTTGCAGCTGCTACTGCTGTTTTCTTGATCTATCCAATTGGTCA 5476
Query 160249 GGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGT 160308
|| || || || | ||||||||| || |||||||||||||| |||| ||| ||||
Sbjct 5477 AGGAAGCTTTTCTGACGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 5536
Query 160309 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGT 160368
||||||||| || ||||| ||||||||||| || || |||||| | || || ||||| ||
Sbjct 5537 ATTCCAAGCTGAGCACAACATCCTTATGCACCCATTTCACATGTTAGGCGTAGCTGGTGT 5596
Query 160369 ATTCGGTGGATCTCTGTTCTCTGCTATGCATGGATCTCTGGTTACTTCTAGTCTCGTCAG 160428
|||||| || || || ||| |||||||||||| || |||| ||||||||| | ||||
Sbjct 5597 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACTTCTAGTTTGATCAG 5656
Query 160429 AGAGACGACAGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAGGAAGAGAC 160488
|| || ||||||| ||| || || | ||||||| ||||||||||||||||| ||
Sbjct 5657 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAAC 5716
Query 160489 TTACAACATCGTCGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGCATCCTT 160548
||||| ||||| || || ||||| || || || || ||||||||||||||||| ||
Sbjct 5717 CTACAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTT 5776
Query 160549 TAACAACTCACGCTCTCTGCACTTCTTCCTCGCTGCTTGGCCTGTTGTTGGAATCTGGTT 160608
|||||||| || ||| | ||||||||||| |||||||||||||| || || || |||||
Sbjct 5777 CAACAACTCTCGTTCTTTACACTTCTTCCTAGCTGCTTGGCCTGTAGTAGGTATTTGGTT 5836
Query 160609 CACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAACCAGTC 160668
|||||| | ||| || || ||||| || || | ||||||||||| |||||||| ||
Sbjct 5837 CACTGCTTTAGGTATTAGCACTATGGCTTTTAACTTAAATGGTTTCAATTTCAACCAATC 5896
Query 160669 CATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCGCGCTGG 160728
| | || | ||||| | || | || || ||||| || | | ||||| |||
Sbjct 5897 TGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATCAACCGTGCTAA 5956
Query 160729 TCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCTTGCTGC 160788
|||| |||||||| ||||| || ||||||||||| ||||||||||| || || |||||
Sbjct 5957 CTTGGGTATGGAAGTTATGCATGAACGTAACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 560 bits (620), Expect = 1e-154
Identities = 726/994 (73%), Gaps = 7/994 (1%)
Strand=Plus/Plus
Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604
|| |||||||||||||| || ||||| || || | || ||||| ||| ||| | ||
Sbjct 396 GACCGTTTCGTTTTTGTAGGTTGGTCCGGTCTATTGCTCTTTCCTTGTGCCTATTTCGCC 455
Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664
| || |||||| |||| || || || || | || ||||||||||||||| | ||
Sbjct 456 GTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCA 515
Query 161665 AGTTCCTATCTTGAGGG-TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723
||||||||| | || || ||||| || | | || || |||||| ||||| ||| |
Sbjct 516 AGTTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCCGCAGTTTCTACTCCTGCTAATAG 574
Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782
| | | || ||| || || || || ||||| ||||| || ||||| ||||| | |
Sbjct 575 TTTAGCACACTCT-TTGTTGTTACTATGGGGCCCTGAAGCACAAGGAGATTTTACTCGTT 633
Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTG 161842
|| ||| | || || || |||| |||||| || || ||||| ||||||| || || |
Sbjct 634 GGTGTCAATTAGGCGGTCTGTGGACTTTTGTTGCTCTTCACGGCGCTTTCGGACTAATAG 693
Query 161843 GATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCT 161901
| |||||| | ||||| |||||||||||||| ||| || | | || ||||| |||||
Sbjct 694 GTTTCATGTTACGTCAATTTGAACTTGCTCGATCTGTTCAAT-TACGACCTTATAATGCA 752
Query 161902 ATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGA 161961
|| || ||||| ||||| ||||| |||||||| || || || || ||||| || ||
Sbjct 753 ATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCCTGATTTATCCGCTAGGT 812
Query 161962 CAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTT 162021
||||| |||||||| |||||| ||||| || || ||||| || | ||| | ||
Sbjct 813 CAGTCTGGTTGGTTCTTTGCGCCAAGTTTTGGTGTAGCGGCTATATTTCGATTCATCCTC 872
Query 162022 TTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGT 162081
|| | ||||| || || |||||||| | || || || || |||||||| || || ||
Sbjct 873 TTTTTCCAAGGGTTTCATAATTGGACATTGAACCCATTTCATATGATGGGAGTTGCTGGG 932
Query 162082 ATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTAC 162141
| ||||| | |||| |||| | |||||||| |||| || || ||||| || | |
Sbjct 933 GTATTGGGCGCTGCTCTGCTATGCGCTATTCATGGTGCTACCGTAGAAAATACTTTATTT 992
Query 162142 CAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACT 162201
|||||||||| |||||||| ||| ||||||| || | || |||| || || |||
Sbjct 993 GAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACT 1052
Query 162202 TACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAAT 162261
|| || ||||| || || ||||| || ||||| || ||||| || |||||||| |||
Sbjct 1053 TATTCAATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAAT 1112
Query 162262 AAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162321
|| |||||||| |||||||||||| | || || || || | ||| | |||| ||| ||
Sbjct 1113 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCT 1172
Query 162322 ATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATT 162381
| || | | || || || || ||||| ||||| || ||||| || |||||||| ||
Sbjct 1173 CTTGGAGTAGTCGGTCTAGCCCTGAATCTACGTGCCTATGACTTCGTTTCTCAGGAAATC 1232
Query 162382 CGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAA 162441
||||||||||| ||||| |||||||| || ||||||||||| ||||| ||||| || |||
Sbjct 1233 CGTGCAGCGGAAGATCCGGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAA 1292
Query 162442 GGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAG 162501
||| ||||||| ||| |||| | ||||| || ||||| ||| || |||||||||||
Sbjct 1293 GGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAG 1352
Query 162502 GAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535
|| ||||| || | || ||||| || | |||||
Sbjct 1353 GAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 1385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 551196389268000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |