Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Periophthalmus_20magnuspinnatus_20[genbank_20GCA_5F000787105.1_20201
4-12-02] 26,060 sequences; 701,696,780 total letters
Query= NC_031906.1
Length=198190
Score E
Sequences producing significant alignments: (Bits) Value
seq21827 605 4e-168
seq25415 495 5e-135
>seq21827
Length=6214
Score = 605 bits (670), Expect = 4e-168
Identities = 736/992 (74%), Gaps = 12/992 (1%)
Strand=Plus/Plus
Query 188851 TTCTGCGAATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 188910
||||| | ||| | ||| ||| | |||||||| || | || ||||| ||||| ||
Sbjct 5031 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATTGGATGGTTTGGTGTTTTG 5090
Query 188911 ATGATCCCTACGCTTCTCG-CTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCAC 188968
||||||||||| ||| | | | ||||| |||| || || |||| || | ||||| |
Sbjct 5091 ATGATCCCTAC-CTTATTGACCGCAACT-TCTGTATTTATTATCGCTTTCATTGCTGCCC 5148
Query 188969 CCCCTGTAGACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACA 189028
| || ||||| |||||||| || || ||||| || |||| || || | ||||||||||
Sbjct 5149 CTCCGGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACA 5208
Query 189029 ACATCATCTCTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCA 189088
| || || |||||||| || | ||| | || || || ||| | || || ||||| |
Sbjct 5209 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCGATAGGTTTGCATTTTTACCCGA 5268
Query 189089 TCTGGGAAGCCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAG 189148
| |||||||| || || | ||||| ||| | ||||| |||||||||| | || | |
Sbjct 5269 TATGGGAAGCGGCTTCCGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 5328
Query 189149 TCTTCCACTTCCTCATCGGCATCTACGCCT---ACATGGGTCGTGAGTGGGAACTCTCTT 189205
| | ||||| | | || | || || | | |||||||||||||||||||| ||
Sbjct 5329 TTCTACACTTTTTACTTGG--TGTA-GCTTGTTATATGGGTCGTGAGTGGGAACTTAGTT 5385
Query 189206 ACCGTCTCGGTATGCGTCCTTGGATCTGC-ATTGCTTACTCTGCACCTGTTGCAGCAGCA 189264
|||||| |||||||| |||||||| ||| |||| || || || ||||||||||| ||
Sbjct 5386 TCCGTCTGGGTATGCGCCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCT 5444
Query 189265 TCCGCAGTCTTTCTGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTG 189324
| || || || || ||||||| |||||||||| || ||||||| ||||| |
Sbjct 5445 ACTGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGCTTTTCTGACGGTATGCCTCTA 5504
Query 189325 GGTATCAGTGGAACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATG 189384
|| ||| ||| || ||||||| |||| |||| |||||||| |||||||||||||| |||
Sbjct 5505 GGAATCTCTGGTACTTTCAACTTCATGATTGTATTCCAAGCTGAGCACAACATCCTTATG 5564
Query 189385 CACCCCTTCCACATGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATG 189444
||||| || |||||| | || || || ||||| ||||| || || || ||| || |||
Sbjct 5565 CACCCATTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATG 5624
Query 189445 CATGGTTCACTCGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAAC 189504
|||||||| | || || ||| || | | |||||||| |||| || || ||
Sbjct 5625 CATGGTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAAT 5684
Query 189505 TATGGTTACAAGTTTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATAT 189564
| ||||||| || || ||||| |||||||| ||||| ||||| ||||||||||| |||
Sbjct 5685 GAAGGTTACAGATTCGGTCAAGAGGAAGAAACCTACAATATCGTAGCTGCTCATGGTTAT 5744
Query 189565 TTCGGTCGTCTTATCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTC 189624
|| || || | |||||||||||||| ||||||||||| ||||| | |||||||||
Sbjct 5745 TTTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAACTCTCGTTCTTTACACTTCTTC 5804
Query 189625 CTCGCTGCCTGGCCAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCA 189684
|| ||||| ||||| || || ||||| ||||| || || | || | ||||| |||||
Sbjct 5805 CTAGCTGCTTGGCCTGTAGTAGGTATTTGGTTCACTGCTTTAGGTATTAGCACTATGGCT 5864
Query 189685 TTCAACCTCAATGGGTTCAACTTCAATCAATCCATTCTTGATGGTCAAGGTCGTGTTCTG 189744
|| ||| | ||||| ||||| ||||| ||||| | ||||| ||||||||||||| |
Sbjct 5865 TTTAACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATT 5924
Query 189745 AACACATGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGT 189804
|| || ||||| || || ||||||||||| | ||||||||||| |||||||| |||
Sbjct 5925 AATACCTGGGCTGATATTATCAACCGTGCTAACTTGGGTATGGAAGTTATGCATGAACGT 5984
Query 189805 AACGCTCACAACTTCCCTCTTGATCTGGCAGC 189836
|||||||| ||||||||||| ||||| || ||
Sbjct 5985 AACGCTCATAACTTCCCTCTAGATCTAGCTGC 6016
>seq25415
Length=1491
Score = 495 bits (548), Expect = 5e-135
Identities = 722/1015 (71%), Gaps = 4/1015 (0%)
Strand=Plus/Plus
Query 189987 TTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCTGGA 190046
||||| || | ||||||||| | | || || || || ||||| |||||||| ||
Sbjct 366 TTTGATATTATGGATGACTGGTTACGGAGGGACCGTTTCGTTTTTGTAGGTTGGTCCGGT 425
Query 190047 TTACTTCTTTTTCCCACTGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGACGTTT 190106
|| | || ||||| ||| ||| |||| | || || ||| |||| || || || |||
Sbjct 426 CTATTGCTCTTTCCTTGTGCCTATTTCGCCGTAGGGGGTTGGTTTACAGGTACAACCTTT 485
Query 190107 GCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGAGGG-TGCTAATTTTCT 190165
| || ||||| ||||| ||| | |||||| || | || || ||| | || | |
Sbjct 486 GTAACTTCATGGTATACCCATGGATTAGCAAGTTCCTATTTGGAAGGCTGCAACTTCT-T 544
Query 190166 TACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTTGGGG 190225
|| || || || || || |||||| || | | | || ||| | | |||| |||||
Sbjct 545 AACCGCCGCAGTTTCTACTCCTGCTAATAGTTTAGCACACTCTTTGTTGTTACTATGGGG 604
Query 190226 TCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTTTTGT 190285
|||||| | ||||| ||||| | ||| ||| | || || || ||| |||||||
Sbjct 605 CCCTGAAGCACAAGGAGATTTTACTCGTTGGTGTCAATTAGGCGGTCTGTGGACTTTTGT 664
Query 190286 GGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGGCACG 190345
|| || ||||| ||||||| ||||| || |||||| | ||||| |||||||| || ||
Sbjct 665 TGCTCTTCACGGCGCTTTCGGACTAATAGGTTTCATGTTACGTCAATTTGAACTTGCTCG 724
Query 190346 -TCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTTTTG 190404
||| || | | || ||||| ||||| || || ||||| ||||| || || |||||||
Sbjct 725 ATCTGTTCAAT-TACGACCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTG 783
Query 190405 TTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCTTCG 190464
|| || || || || || || || ||||| || |||||||||| |||||| || |
Sbjct 784 TTTCTGTATTCCTGATTTATCCGCTAGGTCAGTCTGGTTGGTTCTTTGCGCCAAGTTTTG 843
Query 190465 GTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGCTGA 190524
|||| || || || || || ||| ||||||| || || || || ||||| ||||| |||
Sbjct 844 GTGTAGCGGCTATATTTCGATTCATCCTCTTTTTCCAAGGGTTTCATAATTGGACATTGA 903
Query 190525 ACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAATCC 190584
|||| || || |||||||| ||||| || | |||| | || || || | || || |
Sbjct 904 ACCCATTTCATATGATGGGAGTTGCTGGGGTATTGGGCGCTGCTCTGCTATGCGCTATTC 963
Query 190585 ATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTAAAG 190644
|||||| || ||||| |||||||| | |||||||||||| ||||| || || |
Sbjct 964 ATGGTGCTACCGTAGAAAATACTTTATTTGAAGATGGTGATGGTGCAAATACATTCCGGG 1023
Query 190645 CATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCTGGT 190704
| || || | || |||| ||||| || ||||| |||||||| || ||||| || ||||
Sbjct 1024 CTTTTAACCCAACTCAAGCTGAAGAAACTTATTCAATGGTCACCGCTAACCGCTTTTGGT 1083
Query 190705 CTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCTTTG 190764
| ||||||||||| ||||| || ||||| | ||||| |||||||||||| | ||||
Sbjct 1084 CCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTG 1143
Query 190765 TTCCTGTTATGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTC 190824
| || || | ||| | |||| | | | || | | ||||| || || || || |
Sbjct 1144 TACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGTCTAGCCCTGAATCTAC 1203
Query 190825 GTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAGACTT 190884
|||| |||||||| || || || || ||| | ||||| |||||||| || || |||||||
Sbjct 1204 GTGCCTATGACTTCGTTTCTCAGGAAATCCGTGCAGCGGAAGATCCGGAATTTGAGACTT 1263
Query 190885 TTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTTGATC 190944
| ||||| |||||||| || || || |||||| ||||| | ||| |||| || ||||
Sbjct 1264 TCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCGGCTCAAGATC 1323
Query 190945 AACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999
| || ||||| || || |||| || || || || | || | || ||||||||
Sbjct 1324 AGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT 1378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633873448440000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |