Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pimephales_20promelas_20[genbank_20GCA_5F000700825.1_202014-06-10] 73,057 sequences; 1,219,326,373 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq38686 78.8 1e-12 seq37533 78.8 1e-12 seq7239 78.8 1e-12 seq3615 78.8 1e-12 >seq38686 Length=40144 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 13/112 (12%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 || ||||||| ||||||||| || | ||||||||| |||||||| ||| |||||| Sbjct 35796 TCCAGAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTC 35738 Query 65 ---------GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 35737 AGCGGCGACGGGCG---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 35689 >seq37533 Length=4944 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 13/112 (12%) Strand=Plus/Plus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 || ||||||| ||||||||| || | ||||||||| |||||||| ||| |||||| Sbjct 1185 TCCAGAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTC 1243 Query 65 ---------GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 1244 AGCGGCGACGGGCG---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1292 >seq7239 Length=34013 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 13/112 (12%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 || ||||||| ||||||||| || | ||||||||| |||||||| ||| |||||| Sbjct 7751 TCCAGAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTC 7693 Query 65 ---------GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 7692 AGCGGCGACGGGCG---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 7644 >seq3615 Length=149201 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 13/112 (12%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 || ||||||| ||||||||| || | ||||||||| |||||||| ||| |||||| Sbjct 82000 TCCAGAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTC 81942 Query 65 ---------GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 81941 AGCGGCGACGGGCG---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 81893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594778753338