Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1960 107 8e-21 seq187 82.4 3e-13 >seq1960 Length=1882 Score = 107 bits (118), Expect = 8e-21 Identities = 110/143 (77%), Gaps = 2/143 (1%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||| || |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 1339 GAGGCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 1280 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| | | ||||| |||||| |||||| | Sbjct 1279 ACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAATAACTTTG--A 1222 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||||| || || ||||||| Sbjct 1221 AGAGAGTTCAAGAGGGCGTGAAA 1199 >seq187 Length=1286892 Score = 82.4 bits (90), Expect = 3e-13 Identities = 71/88 (81%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || |||| |||||| | | ||||| ||||||| Sbjct 447774 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAAT 447833 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGT 127 | ||| ||||||||||| |||||| Sbjct 447834 ACCGGCACGAGACCGATAGTCGACAAGT 447861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079914521750