Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq159 183 5e-44 seq698 125 1e-26 seq1369 111 3e-22 >seq159 Length=1584072 Score = 183 bits (202), Expect = 5e-44 Identities = 158/193 (82%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 58 CAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCC 117 ||||||||||||||| |||| || | |||||| |||||| | |||||||||||||| Sbjct 85568 CAGACCTGTTATTGC-TCAATCT-CGTGTGGCTGAAAGCCACTTGTCCCTCTAAGAAGTT 85511 Query 118 AGCCACCAACCATA----GTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATC 173 | | || ||| | | | || ||| |||||| | | |||||||| |||||| Sbjct 85510 GGACGCCGACCGCACGGGGGCTGTGTAACTAGTTAGCATGCCACAGTCTCGTTTGTTATC 85451 Query 174 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGA 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 85450 GGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAGA 85391 Query 234 ATCAAGAAAGAGC 246 ||||||||||||| Sbjct 85390 ATCAAGAAAGAGC 85378 >seq698 Length=170557 Score = 125 bits (138), Expect = 1e-26 Identities = 81/89 (91%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 || |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 39308 TCATTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCCCCA 39249 Query 226 CCCATAGAATCAAGAAAGAGCTATCAATC 254 |||| |||||| ||| ||| || |||||| Sbjct 39248 CCCACAGAATCGAGACAGAACTTTCAATC 39220 >seq1369 Length=12614 Score = 111 bits (122), Expect = 3e-22 Identities = 90/105 (86%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 12 TCCG-TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70 |||| ||||||| |||||||||| |||| | ||||||||||||||||||||||||||||| Sbjct 9430 TCCGCTCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 9489 Query 71 GCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | ||||| | || |||||| | |||| | |||||||||||||| Sbjct 9490 G-CTCAATC-TCGCGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 9532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796769239785