Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1369 188 1e-45 >seq1369 Length=12614 Score = 188 bits (208), Expect = 1e-45 Identities = 199/258 (77%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || ||||| |||||||||||||||| Sbjct 9532 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCGAGATTGAG-CAATAACAGGTCTGTG 9475 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||||||| | || || || | Sbjct 9474 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACACTGAGCGGATCAGCGTGTGTCTAC 9415 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 |||| |||| ||| |||||| | | || | | ||||| | ||||| | | |||| Sbjct 9414 CCTTCGCCGAGAGGCGCGGGTAACCCGCTGAACCCCACTCGTGATAGGGATTGGGGATTG 9355 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | |||||||||||| || |||||||||| |||| ||| |||||||||| Sbjct 9354 CAATTGTTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCACAAGCTCGCGTTGATT 9295 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 9294 AAGTCCCTGCCCTTTGTA 9277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947162254080