Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq786 417 3e-114 seq1193 408 1e-111 seq317 340 6e-91 seq1369 156 1e-35 seq6 102 3e-19 seq32 84.2 7e-14 seq651 80.6 9e-13 seq1176 78.8 3e-12 seq1602 77.0 1e-11 >seq786 Length=140891 Score = 417 bits (462), Expect = 3e-114 Identities = 361/443 (81%), Gaps = 16/443 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 125008 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 124949 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | ||| || Sbjct 124948 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 124889 Query 127 G------GCCCGCGAAGGAC-CTTAACGCCAGAA---AATGGTCGGTGAAGACCAG---T 173 || |||| || | ||| ||||||||| | | | | || | | | Sbjct 124888 ACGCCCCGCACGCGCGGGGCGCTTGACGCCAGAACCGAGAGCCCACTACAGGCTCGCCCT 124829 Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAA 232 |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| ||||| Sbjct 124828 CCCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAA 124769 Query 233 ACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGC 292 | ||||||||||| |||||||||||| ||| ||||||| | | |||||||||||||| Sbjct 124768 GC--CTCCCACTTATCCTACACCTCTCATGTCTCTTCACAATGCCAGACTAGAGTCAAGC 124711 Query 293 TCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 124710 TCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 124651 Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412 || ||| | || |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 124650 CTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 124591 Query 413 GATGACGAGGCATTTGGCTACCT 435 |||||||||||||||||||| || Sbjct 124590 GATGACGAGGCATTTGGCTAACT 124568 >seq1193 Length=26938 Score = 408 bits (452), Expect = 1e-111 Identities = 379/474 (80%), Gaps = 19/474 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | |||||| |||||||||||| Sbjct 3345 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGCACACCTGCGTTACC 3286 Query 67 GTTTAACAG--ATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 |||| |||| | || |||||| ||||||||||||||| || |||| | ||| Sbjct 3285 GTTTGACAGTCAAACACCACCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGAGCGGG 3226 Query 125 TCG------GCCCGCGAAGGAC-CTTAACGCCAGAA---AATGGTCGGTGAAGACCAG-- 172 || || |||| || | ||| ||||||||| | | | | || | | Sbjct 3225 TCACGCCCCGCACGCGCGGGGCGCTTGACGCCAGAACCGAGAGCCCACTACAGGCTCGCC 3166 Query 173 -TTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGC-CG 230 | |||| ||| | ||||| ||||||||||||| ||||||||||||||| ||| || Sbjct 3165 CTCCCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGGCG 3106 Query 231 AAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 || | ||||||||||| |||||||||||| ||| ||||||| | | |||||||||||| Sbjct 3105 AAGC--CTCCCACTTATCCTACACCTCTCATGTCTCTTCACAATGCCAGACTAGAGTCAA 3048 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 3047 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTT 2988 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 |||| ||| | || |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2987 CGCTGGATGGGAGTTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAAT 2928 Query 411 TAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC-CCGCCGTT 463 |||||||||||||||||||||| ||||| ||||||| ||| ||| | |||||| Sbjct 2927 TAGATGACGAGGCATTTGGCTAGTTTAAGGGAGTCATCGTTGCTCTCTGCCGTT 2874 Score = 159 bits (176), Expect = 1e-36 Identities = 93/96 (97%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 194 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACA 135 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||| ||||||||| Sbjct 134 TTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 99 >seq317 Length=273463 Score = 340 bits (376), Expect = 6e-91 Identities = 225/247 (91%), Gaps = 3/247 (1%) Strand=Plus/Minus Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCG-CCGAAACGGCTCCCACTTA 246 ||||| ||||||||||||| ||||||||||||||| ||| ||||| | |||||||||| Sbjct 180256 TAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAAGC--CTCCCACTTA 180199 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | |||||||||||| ||| ||||||| | | || ||||||||||||||||||||||||| Sbjct 180198 TCCTACACCTCTCATGTCTCTTCACAATGCCAGAGTAGAGTCAAGCTCAACAGGGTCTTC 180139 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||||||||| |||||||||||||||||||||||||||||||| ||| | || || Sbjct 180138 TTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATGGGAGTTA 180079 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 180078 GGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 180019 Query 427 TGGCTAC 433 ||||||| Sbjct 180018 TGGCTAC 180012 Score = 159 bits (176), Expect = 1e-36 Identities = 93/96 (97%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 438 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 175126 AGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACA 175067 Query 498 TTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||| ||||||||| Sbjct 175066 TTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 175031 >seq1369 Length=12614 Score = 156 bits (172), Expect = 1e-35 Identities = 91/94 (97%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 440 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATT 499 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 6278 AGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTGACATT 6337 Query 500 CAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||| ||||||||| Sbjct 6338 CAGAGCACTGGGCAGAAATCACATGGCGTCAACA 6371 >seq6 Length=6332452 Score = 102 bits (112), Expect = 3e-19 Identities = 169/240 (70%), Gaps = 17/240 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||| |||| Sbjct 4154811 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACG---GTTACC 4154867 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT- 125 |||| |||| ||| |||| |||| ||| ||||||||||| || |||| | ||| | Sbjct 4154868 GTTTGACAGGTGTACCGCGCCAGTCAAGCTCCCCACCTGCCACTGTCCCCGGAGCGGGTC 4154927 Query 126 -----CGGCCCGCGAAGGAC-CTTAACGCCAGAA---AATGGTCGGTGAAGAC---CAGT 173 | || |||| || | ||| ||||||||| | | | | || | | | Sbjct 4154928 ACGCCCCGCACGCGCGGGGCGCTTGACGCCAGAACCGAGAGCCCACTACAGGCTCGCCCT 4154987 Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGC-GCCGAA 232 |||| ||| | ||||| ||||||||||||| ||||||||||||||| || |||||| Sbjct 4154988 CCCGCCTCACCGGGTAAGTGAAAAAACGATAAGAGTAGTGGTATTTCACCGGCGGCCGAA 4155047 >seq32 Length=3524602 Score = 84.2 bits (92), Expect = 7e-14 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1425085 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAATT 1425133 >seq651 Length=174977 Score = 80.6 bits (88), Expect = 9e-13 Identities = 58/66 (88%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTC-CC 457 ||||||||||||| |||||||||||||||||||| ||||| | ||||| ||| ||| || Sbjct 2454 CGCGTCACTAATTTGATGACGAGGCATTTGGCTATTTTAAGGGGGTCATTGTTGCTCTCC 2513 Query 458 GCCGTT 463 |||||| Sbjct 2514 GCCGTT 2519 >seq1176 Length=21872 Score = 78.8 bits (86), Expect = 3e-12 Identities = 46/48 (96%), Gaps = 0/48 (0%) Strand=Plus/Minus Query 385 TTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 || ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2203 TTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGTATTTGGCTA 2156 >seq1602 Length=7088 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Plus Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 4877 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 4921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635134837280