Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20formosa_20[refseq_20GCF_5F000485575.1_202013-10-28] 3,985 sequences; 748,923,461 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq32 275 5e-69 seq169 132 4e-26 >seq32 Length=3524602 Score = 275 bits (304), Expect = 5e-69 Identities = 991/1523 (65%), Gaps = 53/1523 (3%) Strand=Plus/Minus Query 65416 GTGACGATTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGT 65475 |||| | |||| || |||||||| |||||||| || | ||| ||||||||| || Sbjct 2635683 GTGAGGGTTGACGATCTGGAACTCTCCGGACAGCACCCTGCGGGTGTAGATGTTGCTGGT 2635624 Query 65476 GATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGG 65535 | | || | ||| || ||||||| || || ||||| || || || || |||||||| Sbjct 2635623 GTACGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGACGCCGTGGGCATGGG 2635564 Query 65536 AGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCA 65595 || | || || ||| | || |||| | | || || | || | ||| Sbjct 2635563 CGCCAGCAGCAGGCTGTTCCTCACGCCGTGTTTGGCGATCTTCTCCTTCAGCAGCTTCCA 2635504 Query 65596 GTTCCACATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGAT 65655 || ||||| ||| ||| || | || | ||||| || | || ||| | || | Sbjct 2635503 GTCCCACA--GGTCGGTCGGCGTCTTCTCC----CACATGTCGTACTGGAGGATGCCCTT 2635450 Query 65656 ACTGGCCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCT 65715 |||| | || || || | | | ||||| || ||| ||| |||| ||||| Sbjct 2635449 ACTGACGGGCGAGCCCTCGTATGTCTCGTAGGGGCCGAGCTCTGCGGCGAGTTCGCAGCT 2635390 Query 65716 GGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTC 65775 || ||| || ||||| || ||||||||||| || | || || | || || Sbjct 2635389 GGCCTCCAGGGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCAGCTGGGCTTC 2635330 Query 65776 ATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAAT 65835 ||| ||| |||| | |||||||| || | ||||||||||| || || || || Sbjct 2635329 GGGGCTTTCGAACGGATGTCGCATCAGGATGAAGGCATCGGCCAGACCCTGGACGCCGAT 2635270 Query 65836 ACCGATGGGACGATGACGCAAATTGGAACGTCTCGCCT-CAGGTACAGGGTAGTAATTGA 65894 ||||| || | || ||| ||||| ||||||| || | || || ||||||||||||| Sbjct 2635269 CCCGATCGGCCTGTGGCGCTTGTTGGA-CGTCTCGGCTTCGGGGACCGGGTAGTAATTGA 2635211 Query 65895 TATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTCG--CAATTGTT 65951 | ||||| || || | || | |||| | | | | ||| | || | | Sbjct 2635210 TGTCGATGATCTTGTTGAGGTT---TTTCACGATTACCTTGGTGACGGAGGCCAGCTTCT 2635154 Query 65952 CGAAATCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAA 66011 ||| || ||| | || || || ||| || ||| ||| ||||| | Sbjct 2635153 TGAAGTCGAAA------GTCCGCTCTGGCGTGACGTACATG------TTG---AGGGCGA 2635109 Query 66012 GAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGC 66071 || || ||||||||||| || | |||||| ||| ||||| || | || |||| Sbjct 2635108 TGGAGGCCAGGTTGCAGACGGCCACCTCGTCCTTGCTGGTGTACTCCACCACCTCTGTGC 2635049 Query 66072 ACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCAT 66131 | || || ||||| |||||||||| ||||| || || ||||| | ||||| || | Sbjct 2635048 AGAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAAGCGT 2634989 Query 66132 CCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA 66191 ||||||| | |||||| || || ||||| || |||||||| |||||||||| ||| Sbjct 2634988 CCTTGTAGAGCATGTAGGGCGTCCCGGTTTCGGTCTGGGACTCGATGATGGCGTACCA-- 2634931 Query 66192 GAGC-GC-GTGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA-TGTTCGTAGA 66248 |||| || | ||||||||| | | |||| |||| || || || | ||||| Sbjct 2634930 GAGCTGCTGCGCCTTCACCACCCTCTTCACCCTCCCTTCCTTCTCATATCTGGT-GTAGA 2634872 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | | ||||| || ||||| ||| ||| | ||||||| | |||||||||| Sbjct 2634871 GCTTCTCGAACTCCTCTCCCCAGCACTCGTCCAGCCCGGGACACTCGCTGGGACACATCA 2634812 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACG--CATAAATAGATCAGGTATCCAGAGGGC 66366 ||||| || | || ||| ||| ||| || || || || ||||| | ||| Sbjct 2634811 AGGACCAGTCCTGGT--TGCTCTCCACTCTCTTCATGAACAGGTCCGGGATCCACAAGGC 2634754 Query 66367 GTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGA 66425 |||||| || || | |||| |||||||| | || ||| || || || || |||| Sbjct 2634753 GTAGAAAAGGTCTCTGGCTCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCCAGGA 2634695 Query 66426 ACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGC 66485 | || || | |||| ||||| ||||||||||| |||||||| | || | ||| Sbjct 2634694 AGTCGAACACGTCGAAGTGCCACGGTTCCAGGTACATGGCGAAGGCCCCGGGTCTCTTGT 2634635 Query 66486 CGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCC 66545 ||| || ||||||||||||||||| |||||| | || | || |||||| || | | Sbjct 2634634 TGCCGCCCTGGTCGACGTAGCGAGCCGTGTTGTTGTAAACTCTCAGCATCGGGACCAATC 2634575 Query 66546 CGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACA 66604 |||| || ||||| ||||||||| | ||| | ||| ||| | || || | || Sbjct 2634574 CGTTGGAGTTGCCGTTGGTGCCGGCAATGTAGCTTCC-CGTCGATCGGATGCAGCTCACC 2634516 Query 66605 TTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAAT 66664 || || || || || || | ||| || ||| || || | || || | | Sbjct 2634515 GCCACGCCGATCCCCCCAGCGGACTTGGAAATGAGCGCGCACTGCTTCAGGGTGTCGTAG 2634456 Query 66665 ATGCCGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTT 66722 ||||| || ||| ||| |||| ||||| || ||| |||| || || || || || Sbjct 2634455 ATGCCTTCGATGCTGTCGTCCTTCATGGTGAGCAGGAAGCAGCTGGAC--AGCTGCGGCC 2634398 Query 66723 TGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGT 66782 | || |||| ||||||||| || | ||||| || || | | |||| | Sbjct 2634397 GGTTGGTCCCGGCGTTGAAGAGGGTCGGAGAGGCGTGGGTGAACCACTTCTCCGACAGGA 2634338 Query 66783 AATTGTACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTG-CACATCGC 66841 ||||| ||||||||| |||| ||||||| | || || ||||| | | ||| | | Sbjct 2634337 GGTTGTAGGTCTCGATGGCAGCGTCAATGTCTCGCCCGTGGATCCCAACCGACAC-CCTC 2634279 Query 66842 ATCAGGAGGTATTGAGGCCGTTCGACCAGCCGATCC--TTGATATGCATTAAGTAGGAGC 66899 || || | || || ||||| ||| ||| | ||| ||||| | || | |||||||| Sbjct 2634278 ATGAGCATGTGCTGCGGCCGCTCGGCCA--CTTTCCCGTTGATCTTCAGCAGGTAGGAGC 2634221 Query 66900 GTTCCAGGGTCTTGATACCAAAG 66922 | ||||| ||||||| ||| ||| Sbjct 2634220 GCTCCAGAGTCTTGAAACCGAAG 2634198 >seq169 Length=1474717 Score = 132 bits (146), Expect = 4e-26 Identities = 102/121 (84%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| ||||||||||||| ||| | ||||| | ||||||||||||||||||| Sbjct 1314339 TGGAGCGCTTCACGCAGGAGGTGCAGGTGACAGAGGCCAGGTGTTTCTACGGCTTCCAGA 1314398 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | |||||||| || ||||||| || Sbjct 1314399 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTGCTCATCGACACCTACATCAAGG 1314458 Query 61376 A 61376 | Sbjct 1314459 A 1314459 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || || ||||| || ||||| | ||||||||| ||||| | || || |||| |||||| Sbjct 1313108 GAAAACCCTCGCCGCTTCGTCATCTTCCCCATCCAGTATCACGACATCTGGCAGATGTAC 1313167 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || |||||||||||||| | |||||||| Sbjct 1313168 AAGAAGGCAGAGGCTTCCTTCTGGACAGCAGAGGAGGT 1313205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397548691240400