Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1534 109 1e-21 >seq1534 Length=184825 Score = 109 bits (120), Expect = 1e-21 Identities = 110/139 (79%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGT---GCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGT 95 |||| ||| ||| |||| ||||||| | | | | |||||||||||||||||||||| Sbjct 43430 ATGCTCTTAGCTGAGTGTCTTGCCGGGGCTCGAAG-CGTTTACTTTGAAAAAATTAGAGT 43372 Query 96 GTTCAAAGCAGG---CCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 |||||||||||| || | || |||||| ||| |||||||| ||||||||| | | Sbjct 43371 GTTCAAAGCAGGCCCCCGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCC 43313 Query 153 GGTTCTATTTTGTTGGTTT 171 ||||||||||||| ||||| Sbjct 43312 GGTTCTATTTTGTGGGTTT 43294 Score = 109 bits (120), Expect = 1e-21 Identities = 110/139 (79%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGT---GCCGGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGT 95 |||| ||| ||| |||| ||||||| | | | | |||||||||||||||||||||| Sbjct 49800 ATGCTCTTAGCTGAGTGTCTTGCCGGGGCTCGAAG-CGTTTACTTTGAAAAAATTAGAGT 49742 Query 96 GTTCAAAGCAGG---CCTTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGC 152 |||||||||||| || | || |||||| ||| |||||||| ||||||||| | | Sbjct 49741 GTTCAAAGCAGGCCCCCGTCGCCTGAATACCGCAGCTAGGAATAATGGAATAGGAC-TCC 49683 Query 153 GGTTCTATTTTGTTGGTTT 171 ||||||||||||| ||||| Sbjct 49682 GGTTCTATTTTGTGGGTTT 49664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915035373824