Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2853 122 4e-25 seq1534 118 4e-24 >seq2853 Length=87655 Score = 122 bits (134), Expect = 4e-25 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 87299 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 87358 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| |||||| |||| ||||| ||||||| |||||| | Sbjct 87359 ACCGGCACGAGACCGATAGTCGACAAGTCCCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 87418 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 87419 AGAGAGTTCAACAGGGCGTGAAACCGTTAAGAGGTAAACG 87458 >seq1534 Length=184825 Score = 118 bits (130), Expect = 4e-24 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 ||| || |||||||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 36667 GAGGCGGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 36608 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| ||||||||||| ||||||| | | ||||| ||||||| |||||| | Sbjct 36607 ACCGGCACGAGACCGATAGTCGACAAGTACCTTAAGGGAAAGTTGAAAAGAACTTTGAAG 36548 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 36547 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 36508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079614157400