Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4241 131 8e-29 seq2853 105 3e-21 >seq4241 Length=27636 Score = 131 bits (144), Expect = 8e-29 Identities = 90/102 (88%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||||| ||| |||||||||||||||| Sbjct 27111 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCG 27052 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||| || | | || ||||||| |||||||||| Sbjct 27051 CCGAATCCCCGTCCGACCGGCGGACGCGGGAAATGTGGCGTA 27010 >seq2853 Length=87655 Score = 105 bits (116), Expect = 3e-21 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| || Sbjct 87097 AGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGCGCCGAATCCCCGTCCGA 87156 Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102 | | || ||||||| |||||||||| Sbjct 87157 CCGGCGGACGCGGGAAATGTGGCGTA 87182 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230361145920