Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1534 309 9e-82 seq2853 300 5e-79 seq3502 131 5e-28 seq2475 122 3e-25 seq6549 87.8 5e-15 seq156 87.8 5e-15 seq828 80.6 8e-13 seq231 80.6 8e-13 seq2655 78.8 3e-12 >seq1534 Length=184825 Score = 309 bits (342), Expect = 9e-82 Identities = 225/257 (88%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 43624 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 43683 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43684 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 43743 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 43744 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 43803 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 43804 AGGCACGTAGCGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 43863 Query 240 TC--AAGGCCATGCGAT 254 | | ||||| ||||| Sbjct 43864 ACGGAGGGCCA-GCGAT 43879 Score = 309 bits (342), Expect = 9e-82 Identities = 225/257 (88%), Gaps = 4/257 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 49994 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 50053 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 50054 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 50113 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 50114 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 50173 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| || | ||||||||||||||||||||||||| ||| |||||| | |||||| | Sbjct 50174 AGGCACGTAGCGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGAGACGTCGCCGCC 50233 Query 240 TC--AAGGCCATGCGAT 254 | | ||||| ||||| Sbjct 50234 ACGGAGGGCCA-GCGAT 50249 Score = 185 bits (204), Expect = 3e-44 Identities = 143/167 (86%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA---CTATCAA 397 || ||||||||||||||||||||| |||| |||||||| ||| | |||| | ||||| Sbjct 50402 TTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTA--ACGGTAGAGCGATCAA 50459 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | ||| ||||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 50460 AGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTT 50519 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 50520 AGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 50565 >seq2853 Length=87655 Score = 300 bits (332), Expect = 5e-79 Identities = 204/228 (89%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 79443 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 79384 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 79383 TCCCCGAGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 79324 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 79323 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 79264 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGA 227 |||| || | |||||||||||||||||||||||| ||| |||||| Sbjct 79263 AGGCACGTAGCGCACCATCGAAAGTTGATAGGGCAGACATTCGAATGA 79216 Score = 185 bits (204), Expect = 3e-44 Identities = 143/167 (86%), Gaps = 6/167 (4%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA---CTATCAA 397 || ||||||||||||||||||||| |||| |||||||| ||| | |||| | ||||| Sbjct 80468 TTTGCATGTATTAGCTCTAGAATTGCCACAGTTATCCAAGTA--ACGGTAGAGCGATCAA 80411 Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTT 457 | ||| ||||||||||||||||||||||||||||||||||||| | | | ||||| Sbjct 80410 AGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTT 80351 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 80350 AGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 80305 Score = 134 bits (148), Expect = 4e-29 Identities = 93/104 (89%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||||||||||||||| | | | |||||||| Sbjct 72647 AACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGA 72588 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||| |||||||||| Sbjct 72587 CTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 72545 >seq3502 Length=45064 Score = 131 bits (144), Expect = 5e-28 Identities = 119/148 (80%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 80 AATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGG 139 ||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||| || Sbjct 42764 AATTTGCGC--CTGCTGCCTTCCTTTGATGTGGTAGCTGTTTCTCAAGCTCCCTCTCTGG 42707 Query 140 AATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCG 199 ||||||| || |||| || |||| |||| | | ||| ||| || ||||||| Sbjct 42706 AATCGAATCCCAATTTCCTGTTA-CCGTGGTCATCATAGTATATACGTAGATTACCATCC 42648 Query 200 AAAGTTGATAGGGCAGAAATTTGAATGA 227 ||||||||||||||||| ||| ||||| Sbjct 42647 AAAGTTGATAGGGCAGACATTCAAATGA 42620 >seq2475 Length=88068 Score = 122 bits (134), Expect = 3e-25 Identities = 90/104 (87%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| ||||||||||||||||||||||||||||||||||||| | | |||||| | Sbjct 7059 AACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCAGCCGTGTGTACTTAAA 7118 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| |||||||||| ||||||| || Sbjct 7119 CATGCATGGCTTAATCTTTGAGCCAAGCATATG-CTACTGGGAG 7161 >seq6549 Length=4711 Score = 87.8 bits (96), Expect = 5e-15 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||||||||||||||||||||| |||||||||||||| | | | |||||||| Sbjct 984 AACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCGGCCGTGTGTACTTAGA 1043 Query 461 CATGCATGGCTTAATC 476 | |||||||||||||| Sbjct 1044 CTTGCATGGCTTAATC 1059 >seq156 Length=496218 Score = 87.8 bits (96), Expect = 5e-15 Identities = 70/82 (85%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AG-ATTGCTTATACT 456 |||| ||||||||||||||||||||||||||||||||| |||| || || | |||| Sbjct 48054 TAAATCATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATCAGCCGTGTGTTTACT 47995 Query 457 TAGACATGCATGGCTTAATCTT 478 ||||| ||||||||| |||||| Sbjct 47994 TAGACTTGCATGGCTCAATCTT 47973 >seq828 Length=258452 Score = 80.6 bits (88), Expect = 8e-13 Identities = 59/69 (86%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 404 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACAT 463 |||||||||||||||||||||||||||||||||||||| | | | ||||||||| | Sbjct 250962 GATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGTGTACTTAGACTT 251021 Query 464 GCATGGCTT 472 |||| |||| Sbjct 251022 GCATAGCTT 251030 >seq231 Length=447921 Score = 80.6 bits (88), Expect = 8e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGA 460 ||| |||||||| ||||||||||||| ||| |||||| ||| | || | ||||||| Sbjct 129059 AACCATAACTGACTTAATGAGCCATTTACAGATTCACTATATCGGCTGTGTGAACTTAGA 129118 Query 461 CATGCATGGCTTAATCTTTGAG 482 | ||||||||| |||||||||| Sbjct 129119 CTTGCATGGCTCAATCTTTGAG 129140 >seq2655 Length=78278 Score = 78.8 bits (86), Expect = 3e-12 Identities = 48/50 (96%), Gaps = 1/50 (2%) Strand=Plus/Minus Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct 66848 CTTAGACTTGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 66800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510128309248