Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20latipinna_20[refseq_20GCF_5F001443285.1_202015-11-13] 17,988 sequences; 815,144,743 total letters Query= NC_028482.1 Length=11877 Score E Sequences producing significant alignments: (Bits) Value seq681 93.3 3e-15 >seq681 Length=532227 Score = 93.3 bits (102), Expect = 3e-15 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 2221 TTAGGTCATAAGATTAAAATTCTGGATAGTTACGGATCCGAGACTTACTTCAATTTCTCC 2280 || || || ||||| ||| | ||||| |||||||| ||| ||| ||| ||||| | Sbjct 283861 TTCGGGCAAAAGATGAAAGTGTATGATAGCTACGGATCAGAGGTGTACATCAGTTTCTGC 283920 Query 2281 AAAACTGCTTCAGTCGGATATATAGAACTCCCTCAGACGTTCCGTAAGATTCAGAAATGC 2340 || | ||| || ||| || | || | || ||| | || |||||||||||||| Sbjct 283921 AAGAATGCGTCCGTCAGAGGAGTCGAGATGCCACAGGGAATTCGGAAGATTCAGAAATGT 283980 Query 2341 TATGGTGCAAATAATGCCTTCATACCAACAATGGACGAGTATATCGCCAGCA-CGTTCAG 2399 |||||||| | ||||||||| |||| ||| | || || || || | || || | || || Sbjct 283981 TATGGTGCTACCAATGCCTTCTTACCGACACTCGATGACTACATTG-CATCAGCTTTTAG 284039 Query 2400 TAATGCACAC 2409 |||||||||| Sbjct 284040 TAATGCACAC 284049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 37883532147312