Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2594 196 7e-48 >seq2594 Length=100498 Score = 196 bits (216), Expect = 7e-48 Identities = 189/235 (80%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||||||| |||| |||||||||| |||||| | Sbjct 35806 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTTG-TGACCCGCGCTTACTGGGAATT-C 35863 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||||| | |||||||||||| | ||||| ||||||| |||| | || Sbjct 35864 CTCGTTGATGGGAAACAATTGCAATCCCCAATCCCTATCACGAGTGGGGTTCAGCGGGTT 35923 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGC 178 ||||| ||| ||||| |||| | | || || ||| | || ||||||| |||||||||| Sbjct 35924 ACCCGCGCCTCTCGGCGAAGGGTAGACACACGCTGA-TCCACTCAGTGTGGCGCGCGTGC 35982 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || |||||| Sbjct 35983 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGCGTGGC 36036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751868105075