Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1466 150 3e-34 seq2594 111 3e-22 >seq1466 Length=294354 Score = 150 bits (166), Expect = 3e-34 Identities = 89/93 (96%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 21807 TCATTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCA 21866 Query 226 CCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| |||||| ||||||||||||||||||||| Sbjct 21867 CCCACAGAATCGAGAAAGAGCTATCAATCTGTC 21899 >seq2594 Length=100498 Score = 111 bits (122), Expect = 3e-22 Identities = 86/100 (86%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 35965 TCAGTGTGGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 36023 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 || | || |||||| | |||| | |||||||||||||| Sbjct 36024 AATC-TCGCGTGGCTGAACGCCACTTGTCCCTCTAAGAAG 36062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796660247505