Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq2594 340 3e-91 seq2880 320 3e-85 seq3805 284 2e-74 seq949 280 3e-73 seq2837 279 9e-73 seq473 217 3e-54 seq2947 201 2e-49 seq4554 178 2e-42 seq579 174 3e-41 seq422 163 5e-38 seq228 143 5e-32 seq1401 123 4e-26 seq537 113 8e-23 seq3602 98.7 2e-18 seq83 98.7 2e-18 >seq2594 Length=100498 Score = 340 bits (376), Expect = 3e-91 Identities = 253/295 (86%), Gaps = 1/295 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || | ||||||||||||||||||||||||||| Sbjct 21118 TACTGAGCAGGATTACTATTGCAACAACACATTATCAGTAGGGTAAAACTAACCTGTCTC 21177 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 21178 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 21237 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 21238 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 21297 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 21298 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 21357 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 21358 TAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 21412 Score = 102 bits (112), Expect = 1e-19 Identities = 79/93 (85%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || | ||||||||||||||||||||||||||| Sbjct 20973 TACTGAGCAGGATTACTATTGCAACAACACATTATCAGTAGGGTAAAACTAACCTGTCTC 21032 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 | |||||||||||||||||||||||||||| || Sbjct 21033 ACGACGGTCTAAACCCAGCTCACGTTCCCTNTT 21065 >seq2880 Length=115478 Score = 320 bits (354), Expect = 3e-85 Identities = 228/262 (87%), Gaps = 0/262 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct 70454 ATCAGTAGGGTAAAACTAACCTCTCTCAAGATGGTCTAAACCCAGCTCACGTTCCCTATT 70395 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 70394 AGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 70335 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 70334 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCT 70275 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||| || | ||| | | | |||||||| ||||| Sbjct 70274 GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCC 70215 Query 273 ACACTTTCATGGTTTGTATTCA 294 | |||||| | |||||||| Sbjct 70214 CCGCTTTCACTATCTGTATTCA 70193 >seq3805 Length=36723 Score = 284 bits (314), Expect = 2e-74 Identities = 180/195 (92%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1950 ATCAGTCGGGTCAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATT 1891 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| Sbjct 1890 AGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 1831 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 | ||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||| Sbjct 1830 TTGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACCAGCCAGTCATCCCT 1771 Query 213 GTGGTAACTTTTCTG 227 || |||||||||||| Sbjct 1770 GTTGTAACTTTTCTG 1756 >seq949 Length=293914 Score = 280 bits (310), Expect = 3e-73 Identities = 179/195 (92%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 56650 ATCAGTCGGGTCAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATC 56709 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| Sbjct 56710 AGTGGGTGAACAATCCATCGCTTAGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACA 56769 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 | ||||||||||||||| ||||||||||||||||||||| ||||| ||||||| |||||| Sbjct 56770 TTGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACCAGCCAGTCATCCCT 56829 Query 213 GTGGTAACTTTTCTG 227 || |||||||||||| Sbjct 56830 GTTGTAACTTTTCTG 56844 >seq2837 Length=68219 Score = 279 bits (308), Expect = 9e-73 Identities = 174/187 (93%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 ||||||||||||| |||||||||||||| |||||||||| |||||||||||||||| ||| Sbjct 41535 ATCAGTAGGGTAAGACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCCATT 41594 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||| Sbjct 41595 AGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGAAAGAGCCGACA 41654 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 41655 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCT 41714 Query 213 GTGGTAA 219 ||||||| Sbjct 41715 GTGGTAA 41721 >seq473 Length=440737 Score = 217 bits (240), Expect = 3e-54 Identities = 161/187 (86%), Gaps = 6/187 (3%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||||||||||||||||| ||| ||| |||||| |||||||||| |||| |||| Sbjct 114668 ATCAGTAGGGTAAAACTAACCTGTGTCACGACAGTCTAATCCCAGCTCACATTCCATATT 114609 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||| ||||||||||||| ||| |||||||||||| ||||||||||||||| ||| Sbjct 114608 AGTGGCTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCAACA 114549 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| || | |||||||||||||| ||||| ||||||||||| Sbjct 114548 TCGAAGGATCAAAAAGCGACATTGCTATGAACGCTTG---GCCAC---CCAGTTATCCCC 114495 Query 213 GTGGTAA 219 |||||| Sbjct 114494 ATGGTAA 114488 >seq2947 Length=64572 Score = 201 bits (222), Expect = 2e-49 Identities = 150/176 (85%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 54695 GAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCT 54636 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 54635 ATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGC 54576 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 | ||| | | | |||||||| ||||| | |||||| ||| |||||||| Sbjct 54575 TTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 54520 >seq4554 Length=28983 Score = 178 bits (196), Expect = 2e-42 Identities = 133/156 (85%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 139 AGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACA 198 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 28983 AGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACA 28924 Query 199 AGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAA 258 ||||||||||||||||||||||||||||| |||||| || | ||| | | | | Sbjct 28923 AGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGA 28864 Query 259 AGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 ||||||| ||||| | |||||| ||| |||||||| Sbjct 28863 AGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 28828 >seq579 Length=350401 Score = 174 bits (192), Expect = 3e-41 Identities = 127/146 (87%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || | ||||||||||||||||||||||||||| Sbjct 234587 TACTGAGCAGGATTACTATTGCAACAACACATTATCAGTAGGGTAAAACTAACCTGTCTC 234646 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 234647 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 234706 Query 120 AATTCTGCTTCGGTATGATAGGAAGA 145 ||||||||||| |||||||||||| Sbjct 234707 AATTCTGCTTCACAATGATAGGAAGA 234732 >seq422 Length=889785 Score = 163 bits (180), Expect = 5e-38 Identities = 125/145 (86%), Gaps = 5/145 (3%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||| |||||||||| ||||||| ||| |||||||||||| ||| |||||||| Sbjct 285577 TCATCAGTAGGATAAAACTAACTTGTCTCACGACAGTCTAAACCCAGTTCATGTTCCCTA 285636 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 || ||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 285637 -TAATGGGTGAACAATCCAACGCTT-GTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 285694 Query 151 CATCGAAGGATCAAAAAGCAACGTC 175 ||| |||||||||||| | ||| Sbjct 285695 TATC---GGATCAAAAAGCGATGTC 285716 >seq228 Length=577866 Score = 143 bits (158), Expect = 5e-32 Identities = 111/131 (85%), Gaps = 2/131 (2%) Strand=Plus/Plus Query 32 CATCAG--TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||| | ||||||||| | | || |||||||||| ||| ||||||||||||||| || Sbjct 419484 CATCAGGGTGGGGTAAAACCAGCTTGCCTCATGACGGACTACACCCAGCTCACGTTCTCT 419543 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 | |||||||||||||||||||||||| ||||||||||| |||| ||||||||||| Sbjct 419544 AGTAGTGGGTGAACAATCCAACGCTTGGTAAATTCTGCTTCACAATGACAGGAAGAGCCG 419603 Query 150 ACATCGAAGGA 160 ||||| ||||| Sbjct 419604 ACATCAAAGGA 419614 >seq1401 Length=169515 Score = 123 bits (136), Expect = 4e-26 Identities = 90/103 (87%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||||| | Sbjct 83318 ATCAGTAGGG-AAAACTAACATGTCTCACGACGGTCTAAACCAGGCTCACGTTCCCTACT 83376 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTAT 135 ||||||||||||||||||| | | ||||||||||| |||| Sbjct 83377 AGTGGGTGAACAATCCAACACCTGGTGAATTCTGCTTTCGTAT 83419 >seq537 Length=322532 Score = 113 bits (124), Expect = 8e-23 Identities = 94/114 (82%), Gaps = 1/114 (1%) Strand=Plus/Plus Query 3 CTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTCAT 61 || ||| | |||||||||| | || | |||| ||| ||||||||||| ||||||| Sbjct 212405 CTGAGCAGGATTACCATTGCAACAACACATTATCAATAGAGTAAAACTAACTTGTCTCAC 212464 Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115 || ||||||||||||||||| |||||||||||| |||||||||||||| |||| Sbjct 212465 AACAGTCTAAACCCAGCTCACATTCCCTATTAGTAGGTGAACAATCCAAAGCTT 212518 >seq3602 Length=41555 Score = 98.7 bits (108), Expect = 2e-18 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 ||||||| ||||| ||||| ||| |||||||||||||||||||| |||||||||| |||| Sbjct 1 GTCGCTAAGAACGGTTGGCCGCCCCAAGCCAGTTATCCCTGTGGGAACTTTTCTGACACC 60 Query 233 TCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATT 292 || || | ||| | | | |||||||| ||||| |||||| ||| |||||| Sbjct 61 TCCTGCTTAAAACCCAAAAAGTCAGAAGGATCGTGAGGCCCTGCTTTCACGGTCTGTATT 120 Query 293 CA 294 || Sbjct 121 CA 122 >seq83 Length=612715 Score = 98.7 bits (108), Expect = 2e-18 Identities = 83/101 (82%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || | ||||||| ||||||||||||||||||| Sbjct 513016 TACTGAGCAGGATTACTATTGCAACAACACATTATCAGTAAGGTAAAACTAACCTGTCTC 512957 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTG 100 | |||||||||||| || ||||||||||| |||||||| || Sbjct 512956 ACGACGGTCTAAACTCACCTCACGTTCCCGATTAGTGGATG 512916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854245310880