Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Poecilia_20mexicana_20[refseq_20GCF_5F001443325.1_202015-11-13] 18,105 sequences; 801,711,499 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2594 104 4e-20 seq2880 86.0 1e-14 >seq2594 Length=100498 Score = 104 bits (114), Expect = 4e-20 Identities = 93/114 (82%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | || | || |||| ||| || | Sbjct 20975 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGCAGCCAAT 20918 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| ||||||||||||||||||||| || Sbjct 20917 GGGGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAACCC 20864 >seq2880 Length=115478 Score = 86.0 bits (94), Expect = 1e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| | ||||| | || | || |||| || || || |||||||||||||||| Sbjct 70504 TTCAGAC-ATTTGGTGTATGTGCTTGCCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 70562 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 |||||||| |||||||||||||||||||||||| Sbjct 70563 GGGATTATGACTGAACGCCTCTAAGTCAGAATCC 70596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819056318720